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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
53 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170065438
CDZM01001528
399200
Bacteroidota
CAT
Met
>WENV170065489
CDZM01004052
398836
Bacteroidota
GCA
Cys
>WENV170065498
CDZM01004289
117741
Bacteroidota
TAG
Leu
>WENV170065505
CDZM01004713
158068
Bacteroidota
GGG
Pro
>WENV170065506
CDZM01004713
280446
Bacteroidota
TTT
Lys
>WENV170065509
CDZM01004727
280557
Bacteroidota
CAT
Met
>WENV170065512
CDZM01005099
99847
Bacteroidota
GTA
Tyr
>WENV170065522
CDZM01005391
332896
Bacteroidota
TTT
Lys
>WENV170065535
CDZM01006142
280446
Bacteroidota
TTT
Lys
>WENV170065547
CDZM01006368
282712
Bacteroidota
TTT
Lys
>WENV170065588
CDZM01008509
398836
Bacteroidota
GCA
Cys
>WENV170065599
CDZM01009111
140771
Bacteroidota
>WENV170065601
CDZM01009111
140771
Bacteroidota
>WENV170065608
CDZM01009876
484496
Bacteroidota
TTG
Gln
>WENV170065636
CDZM01011328
480404
Bacteroidota
TTG
Gln
>WENV170065684
CDZM01013539
280451
Bacteroidota
CGT
Thr
>WENV170065685
CDZM01013541
175838
Bacteroidota
GTT
Asn
>WENV170065687
CDZM01013541
56072
Bacteroidota
TAA
Leu
>WENV170065698
CDZM01014474
280557
Bacteroidota
CAT
Met
>WENV170065721
CDZM01015039
398836
Bacteroidota
GCA
Cys
>WENV170065730
CDZM01015210
203954
Bacteroidota
GTC
Asp
>WENV170065738
CDZM01015553
398836
Bacteroidota
GCA
Cys
>WENV170065743
CDZM01015952
398836
Bacteroidota
GCA
Cys
>WENV170065747
CDZM01016150
484496
Bacteroidota
TTG
Gln
>WENV170065749
CDZM01016156
488746
Bacteroidota
CTG
Gln
>WENV170065750
CDZM01016156
20206
Bacteroidota
GGA
Ser
>WENV170065763
CDZM01016400
280478
Bacteroidota
GCC
Gly
>WENV170065770
CDZM01016796
175904
Bacteroidota
CGG
Pro
>WENV170065783
CDZM01017366
332896
Bacteroidota
TTT
Lys
>WENV170065786
CDZM01017568
57807
Bacteroidota
TGA
Ser
>WENV170065789
CDZM01017748
398836
Bacteroidota
GCA
Cys
>WENV170065802
CDZM01018766
280446
Bacteroidota
TTT
Lys
>WENV170065806
CDZM01018953
480318
Bacteroidota
CTG
Gln
>WENV170065831
CDZM01020409
484496
Bacteroidota
TTG
Gln
>WENV170065836
CDZM01020670
201819
Bacteroidota
CAT
Met
>WENV170065843
CDZM01020925
158068
Bacteroidota
GGG
Pro
>WENV170065847
CDZM01021058
118089
Bacteroidota
TAG
Leu
>WENV170065862
CDZM01021632
280446
Bacteroidota
TTT
Lys
>WENV170065866
CDZM01021639
398829
Bacteroidota
CCT
Arg
>WENV170065870
CDZM01021816
175902
Bacteroidota
GGC
Ala
>WENV170065882
CDZM01022405
280478
Bacteroidota
GCC
Gly
>WENV170065884
CDZM01022405
280478
Bacteroidota
GCC
Gly
>WENV170065885
CDZM01022407
20449
Bacteroidota
GGA
Ser
>WENV170065890
CDZM01022407
280478
Bacteroidota
GCC
Gly
>WENV170065892
CDZM01022407
280478
Bacteroidota
GCC
Gly
>WENV170065894
CDZM01022407
280478
Bacteroidota
GCC
Gly
>WENV170065897
CDZM01022407
400088
Bacteroidota
GGT
Thr
>WENV170065907
CDZM01022562
398836
Bacteroidota
GCA
Cys
>WENV170065930
CDZM01023859
99847
Bacteroidota
GTA
Tyr
>WENV170065948
CDZM01024272
203954
Bacteroidota
GTC
Asp
>WENV170065974
CDZM01025369
176192
Bacteroidota
TCT
Arg
>WENV170065975
CDZM01025369
399200
Bacteroidota
CAT
Met
>WENV170065976
CDZM01025369
285750
Bacteroidota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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