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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
118 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170067077
CDZO01000001
280478
Bacteroidota
GCC
Gly
>WENV170067078
CDZO01000001
74084
Bacteroidota
CAG
Leu
>WENV170067088
CDZO01000049
398836
Bacteroidota
GCA
Cys
>WENV170067090
CDZO01000320
29791
Bacteroidota
GCT
Ser
>WENV170067091
CDZO01000320
398860
Bacteroidota
CTC
Glu
>WENV170067093
CDZO01000337
280446
Bacteroidota
TTT
Lys
>WENV170067105
CDZO01000668
289031
Bacteroidota
CAT
Met
>WENV170067111
CDZO01001027
280446
Bacteroidota
TTT
Lys
>WENV170067149
CDZO01002306
280557
Bacteroidota
CAT
Met
>WENV170067167
CDZO01003233
280446
Bacteroidota
TTT
Lys
>WENV170067181
CDZO01003568
280478
Bacteroidota
GCC
Gly
>WENV170067183
CDZO01003568
280478
Bacteroidota
GCC
Gly
>WENV170067212
CDZO01004774
398836
Bacteroidota
GCA
Cys
>WENV170067236
CDZO01005463
203954
Bacteroidota
GTC
Asp
>WENV170067240
CDZO01005482
399200
Bacteroidota
CAT
Met
>WENV170067259
CDZO01006124
99847
Bacteroidota
GTA
Tyr
>WENV170067265
CDZO01006470
175906
Bacteroidota
GTG
His
>WENV170067271
CDZO01006487
56072
Bacteroidota
TAA
Leu
>WENV170067272
CDZO01006487
398829
Bacteroidota
CCT
Arg
>WENV170067285
CDZO01007082
175902
Bacteroidota
GGC
Ala
>WENV170067306
CDZO01007819
351598
Bacteroidota
CGG
Pro
>WENV170067337
CDZO01008423
20449
Bacteroidota
GGA
Ser
>WENV170067341
CDZO01008741
175844
Bacteroidota
GGC
Ala
>WENV170067346
CDZO01008780
280451
Bacteroidota
CGT
Thr
>WENV170067364
CDZO01009995
74084
Bacteroidota
CAG
Leu
>WENV170067367
CDZO01009995
175904
Bacteroidota
CGG
Pro
>WENV170067368
CDZO01009995
280530
Bacteroidota
CCA
Trp
>WENV170067403
CDZO01011370
484496
Bacteroidota
TTG
Gln
>WENV170067427
CDZO01011994
400088
Bacteroidota
GGT
Thr
>WENV170067429
CDZO01011999
118089
Bacteroidota
TAG
Leu
>WENV170067441
CDZO01012325
399200
Bacteroidota
CAT
Met
>WENV170067446
CDZO01012400
175903
Bacteroidota
GTG
His
>WENV170067455
CDZO01012673
405877
Bacteroidota
GGT
Thr
>WENV170067478
CDZO01013613
201819
Bacteroidota
CAT
Met
>WENV170067503
CDZO01014497
351598
Bacteroidota
CGG
Pro
>WENV170067527
CDZO01015443
365112
Bacteroidota
TTT
Lys
>WENV170067530
CDZO01015445
175904
Bacteroidota
CGG
Pro
>WENV170067541
CDZO01016049
203954
Bacteroidota
GTC
Asp
>WENV170067542
CDZO01016049
203954
Bacteroidota
GTC
Asp
>WENV170067543
CDZO01016049
480325
Bacteroidota
CTG
Gln
>WENV170067544
CDZO01016049
480325
Bacteroidota
CTG
Gln
>WENV170067546
CDZO01016346
118089
Bacteroidota
TAG
Leu
>WENV170067547
CDZO01016346
73011
Bacteroidota
CAA
Leu
>WENV170067550
CDZO01016361
488746
Bacteroidota
CTG
Gln
>WENV170067551
CDZO01016361
20206
Bacteroidota
GGA
Ser
>WENV170067556
CDZO01016421
280553
Bacteroidota
TTT
Lys
>WENV170067566
CDZO01016690
178907
Bacteroidota
TCT
Arg
>WENV170067567
CDZO01016690
285750
Bacteroidota
CCC
Gly
>WENV170067577
CDZO01017643
140771
Bacteroidota
>WENV170067580
CDZO01017643
140771
Bacteroidota
>WENV170067585
CDZO01017659
174201
Bacteroidota
GGG
Pro
>WENV170067588
CDZO01017953
174201
Bacteroidota
GGG
Pro
>WENV170067623
CDZO01019448
170323
Bacteroidota
GGG
Pro
>WENV170067626
CDZO01019452
27502
Bacteroidota
GGA
Ser
>WENV170067633
CDZO01019847
280553
Bacteroidota
TTT
Lys
>WENV170067639
CDZO01020128
99847
Bacteroidota
GTA
Tyr
>WENV170067642
CDZO01020128
175838
Bacteroidota
GTT
Asn
>WENV170067643
CDZO01020128
175838
Bacteroidota
GTT
Asn
>WENV170067658
CDZO01020752
27502
Bacteroidota
GGA
Ser
>WENV170067671
CDZO01021366
351598
Bacteroidota
CGG
Pro
>WENV170067676
CDZO01021712
351598
Bacteroidota
CGG
Pro
>WENV170067696
CDZO01022373
174201
Bacteroidota
GGG
Pro
>WENV170067700
CDZO01022430
117741
Bacteroidota
TAG
Leu
>WENV170067730
CDZO01023371
404226
Bacteroidota
CCT
Arg
>WENV170067731
CDZO01023371
398871
Bacteroidota
TTC
Glu
>WENV170067732
CDZO01023371
398871
Bacteroidota
TTC
Glu
>WENV170067753
CDZO01024279
56493
Bacteroidota
TGA
Ser
>WENV170067795
CDZO01025577
186874
Bacteroidota
CAT
Met
>WENV170067800
CDZO01025903
280478
Bacteroidota
GCC
Gly
>WENV170067802
CDZO01025904
398836
Bacteroidota
GCA
Cys
>WENV170067814
CDZO01026212
280478
Bacteroidota
GCC
Gly
>WENV170067831
CDZO01026568
69204
Bacteroidota
TGA
Ser
>WENV170067847
CDZO01026604
176192
Bacteroidota
TCT
Arg
>WENV170067855
CDZO01026903
289031
Bacteroidota
CAT
Met
>WENV170067859
CDZO01027145
280557
Bacteroidota
CAT
Met
>WENV170067860
CDZO01027168
175902
Bacteroidota
GGC
Ala
>WENV170067861
CDZO01027259
289031
Bacteroidota
CAT
Met
>WENV170067868
CDZO01027452
399200
Bacteroidota
CAT
Met
>WENV170067871
CDZO01027453
175906
Bacteroidota
GTG
His
>WENV170067872
CDZO01027453
175906
Bacteroidota
GTG
His
>WENV170067875
CDZO01027482
174201
Bacteroidota
GGG
Pro
>WENV170067889
CDZO01027812
20449
Bacteroidota
GGA
Ser
>WENV170067900
CDZO01028170
398828
Bacteroidota
CCG
Arg
>WENV170067902
CDZO01028172
27502
Bacteroidota
GGA
Ser
>WENV170067904
CDZO01028202
285750
Bacteroidota
CCC
Gly
>WENV170067925
CDZO01029202
488746
Bacteroidota
CTG
Gln
>WENV170067926
CDZO01029202
20206
Bacteroidota
GGA
Ser
>WENV170067936
CDZO01029505
365112
Bacteroidota
TTT
Lys
>WENV170067937
CDZO01029506
483416
Bacteroidota
CTG
Gln
>WENV170067948
CDZO01029847
399200
Bacteroidota
CAT
Met
>WENV170067951
CDZO01029855
20206
Bacteroidota
GGA
Ser
>WENV170067952
CDZO01029914
484496
Bacteroidota
TTG
Gln
>WENV170067963
CDZO01030450
280478
Bacteroidota
GCC
Gly
>WENV170067965
CDZO01030450
280478
Bacteroidota
GCC
Gly
>WENV170067973
CDZO01030497
365112
Bacteroidota
TTT
Lys
>WENV170067993
CDZO01031411
398836
Bacteroidota
GCA
Cys
>WENV170067999
CDZO01032055
351598
Bacteroidota
CGG
Pro
>WENV170068012
CDZO01032412
69204
Bacteroidota
TGA
Ser
>WENV170068013
CDZO01032412
69204
Bacteroidota
TGA
Ser
>WENV170068030
CDZO01032740
398836
Bacteroidota
GCA
Cys
>WENV170068052
CDZO01033727
365112
Bacteroidota
TTT
Lys
>WENV170068087
CDZO01034755
365112
Bacteroidota
TTT
Lys
>WENV170068097
CDZO01035083
484496
Bacteroidota
TTG
Gln
>WENV170068098
CDZO01035335
175838
Bacteroidota
GTT
Asn
>WENV170068099
CDZO01035335
175838
Bacteroidota
GTT
Asn
>WENV170068100
CDZO01035335
175838
Bacteroidota
GTT
Asn
>WENV170068111
CDZO01035654
398829
Bacteroidota
CCT
Arg
>WENV170068132
CDZO01036009
280478
Bacteroidota
GCC
Gly
>WENV170068134
CDZO01036009
280478
Bacteroidota
GCC
Gly
>WENV170068136
CDZO01036012
69204
Bacteroidota
TGA
Ser
>WENV170068139
CDZO01036405
280446
Bacteroidota
TTT
Lys
>WENV170068163
CDZO01037370
183889
Bacteroidota
GGC
Ala
>WENV170068169
CDZO01037397
69204
Bacteroidota
TGA
Ser
>WENV170068172
CDZO01037621
483416
Bacteroidota
CTG
Gln
>WENV170068178
CDZO01037957
99847
Bacteroidota
GTA
Tyr
>WENV170068179
CDZO01037957
174201
Bacteroidota
GGG
Pro
>WENV170068232
CDZO01040449
483416
Bacteroidota
CTG
Gln
>WENV170068246
CDZO01041005
21127
Bacteroidota
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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