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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
87 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170068264
CDZP01000333
95559
Bacteroidota
TAG
Leu
>WENV170068281
CDZP01000802
235102
Bacteroidota
CGT
Thr
>WENV170068296
CDZP01001585
44852
Bacteroidota
TAA
Leu
>WENV170068311
CDZP01001939
113604
Bacteroidota
>WENV170068308
CDZP01001939
113604
Bacteroidota
>WENV170068305
CDZP01001939
113604
Bacteroidota
>WENV170068332
CDZP01003083
338125
Bacteroidota
CCT
Arg
>WENV170068356
CDZP01003802
415410
Bacteroidota
TTG
Gln
>WENV170068371
CDZP01004256
52358
Bacteroidota
TGA
Ser
>WENV170068390
CDZP01004674
235129
Bacteroidota
GCC
Gly
>WENV170068388
CDZP01004674
235129
Bacteroidota
GCC
Gly
>WENV170068402
CDZP01004994
144590
Bacteroidota
GTT
Asn
>WENV170068401
CDZP01004994
144590
Bacteroidota
GTT
Asn
>WENV170068400
CDZP01004994
144590
Bacteroidota
GTT
Asn
>WENV170068424
CDZP01005816
235129
Bacteroidota
GCC
Gly
>WENV170068427
CDZP01006150
144655
Bacteroidota
GGC
Ala
>WENV170068462
CDZP01007413
80607
Bacteroidota
GTA
Tyr
>WENV170068463
CDZP01007414
338124
Bacteroidota
CCG
Arg
>WENV170068473
CDZP01007841
16224
Bacteroidota
GGA
Ser
>WENV170068478
CDZP01008160
339341
Bacteroidota
GGT
Thr
>WENV170068494
CDZP01008622
338132
Bacteroidota
GCA
Cys
>WENV170068496
CDZP01008871
338314
Bacteroidota
CCT
Arg
>WENV170068511
CDZP01009358
144656
Bacteroidota
GTG
His
>WENV170068541
CDZP01010976
144657
Bacteroidota
CGG
Pro
>WENV170068583
CDZP01012589
243025
Bacteroidota
CAT
Met
>WENV170068642
CDZP01013746
243025
Bacteroidota
CAT
Met
>WENV170068652
CDZP01014150
415410
Bacteroidota
TTG
Gln
>WENV170068682
CDZP01015395
238121
Bacteroidota
CTT
Lys
>WENV170068681
CDZP01015395
238121
Bacteroidota
CTT
Lys
>WENV170068680
CDZP01015395
238121
Bacteroidota
CTT
Lys
>WENV170068700
CDZP01015827
154643
Bacteroidota
CAT
Met
>WENV170068708
CDZP01015836
23696
Bacteroidota
GCT
Ser
>WENV170068724
CDZP01017035
235097
Bacteroidota
TTT
Lys
>WENV170068725
CDZP01017036
419272
Bacteroidota
CTG
Gln
>WENV170068726
CDZP01017036
16220
Bacteroidota
GGA
Ser
>WENV170068786
CDZP01019078
338486
Bacteroidota
CAT
Met
>WENV170068788
CDZP01019544
144596
Bacteroidota
GGC
Ala
>WENV170068824
CDZP01020029
52358
Bacteroidota
TGA
Ser
>WENV170068833
CDZP01020941
144933
Bacteroidota
TCT
Arg
>WENV170068854
CDZP01021415
425638
Bacteroidota
CTG
Gln
>WENV170068873
CDZP01022279
341950
Bacteroidota
>WENV170068878
CDZP01022693
132360
Bacteroidota
GGG
Pro
>WENV170068879
CDZP01022693
425638
Bacteroidota
CTG
Gln
>WENV170068889
CDZP01023477
235207
Bacteroidota
CAT
Met
>WENV170068982
CDZP01027172
243025
Bacteroidota
CAT
Met
>WENV170068983
CDZP01027232
338486
Bacteroidota
CAT
Met
>WENV170069017
CDZP01027980
235207
Bacteroidota
CAT
Met
>WENV170069020
CDZP01028383
132360
Bacteroidota
GGG
Pro
>WENV170069046
CDZP01029558
52358
Bacteroidota
TGA
Ser
>WENV170069070
CDZP01030419
95875
Bacteroidota
TAG
Leu
>WENV170069076
CDZP01030802
154643
Bacteroidota
CAT
Met
>WENV170069089
CDZP01031536
414426
Bacteroidota
CTG
Gln
>WENV170069103
CDZP01031940
151960
Bacteroidota
GGC
Ala
>WENV170069105
CDZP01031987
80607
Bacteroidota
GTA
Tyr
>WENV170069121
CDZP01032418
113604
Bacteroidota
>WENV170069144
CDZP01033243
52358
Bacteroidota
TGA
Ser
>WENV170069163
CDZP01033688
353927
Bacteroidota
TTC
Glu
>WENV170069240
CDZP01036303
80614
Bacteroidota
>WENV170069241
CDZP01036303
185921
Bacteroidota
GTC
Asp
>WENV170069272
CDZP01037603
52358
Bacteroidota
TGA
Ser
>WENV170069290
CDZP01037644
193809
Bacteroidota
CAT
Met
>WENV170069289
CDZP01037644
193809
Bacteroidota
CAT
Met
>WENV170069352
CDZP01039699
17323
Bacteroidota
GGA
Ser
>WENV170069373
CDZP01040093
52358
Bacteroidota
TGA
Ser
>WENV170069405
CDZP01041242
338125
Bacteroidota
CCT
Arg
>WENV170069406
CDZP01041245
240012
Bacteroidota
CCC
Gly
>WENV170069419
CDZP01041695
341950
Bacteroidota
>WENV170069463
CDZP01043666
338132
Bacteroidota
GCA
Cys
>WENV170069480
CDZP01044538
338132
Bacteroidota
GCA
Cys
>WENV170069495
CDZP01044664
144657
Bacteroidota
CGG
Pro
>WENV170069524
CDZP01046234
235097
Bacteroidota
TTT
Lys
>WENV170069535
CDZP01046943
414426
Bacteroidota
CTG
Gln
>WENV170069547
CDZP01048020
425638
Bacteroidota
CTG
Gln
>WENV170069561
CDZP01048789
19528
Bacteroidota
GGA
Ser
>WENV170069562
CDZP01048793
185921
Bacteroidota
GTC
Asp
>WENV170069596
CDZP01049572
58715
Bacteroidota
GAG
Leu
>WENV170069594
CDZP01049572
235129
Bacteroidota
GCC
Gly
>WENV170069615
CDZP01050290
415410
Bacteroidota
TTG
Gln
>WENV170069620
CDZP01050300
80607
Bacteroidota
GTA
Tyr
>WENV170069625
CDZP01050300
144590
Bacteroidota
GTT
Asn
>WENV170069624
CDZP01050300
144590
Bacteroidota
GTT
Asn
>WENV170069623
CDZP01050300
144590
Bacteroidota
GTT
Asn
>WENV170069630
CDZP01050539
132360
Bacteroidota
GGG
Pro
>WENV170069638
CDZP01050737
80614
Bacteroidota
>WENV170069641
CDZP01050744
338132
Bacteroidota
GCA
Cys
>WENV170069652
CDZP01051154
344692
Bacteroidota
GGT
Thr
>WENV170069654
CDZP01051156
144933
Bacteroidota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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