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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
87 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170079359
CDZW01002127
140771
Bacteroidota
>WENV170079362
CDZW01002127
140771
Bacteroidota
>WENV170080326
CDZW01041304
140771
Bacteroidota
>WENV170080329
CDZW01041304
140771
Bacteroidota
>WENV170080332
CDZW01041304
140771
Bacteroidota
>WENV170079379
CDZW01002526
289031
Bacteroidota
CAT
Met
>WENV170079712
CDZW01015809
289031
Bacteroidota
CAT
Met
>WENV170079738
CDZW01016553
289031
Bacteroidota
CAT
Met
>WENV170079806
CDZW01019682
280557
Bacteroidota
CAT
Met
>WENV170080123
CDZW01032056
280557
Bacteroidota
CAT
Met
>WENV170079329
CDZW01001143
201819
Bacteroidota
CAT
Met
>WENV170079478
CDZW01006035
186874
Bacteroidota
CAT
Met
>WENV170080314
CDZW01040897
186874
Bacteroidota
CAT
Met
>WENV170080453
CDZW01046622
186874
Bacteroidota
CAT
Met
>WENV170080003
CDZW01028283
398828
Bacteroidota
CCG
Arg
>WENV170079741
CDZW01016923
398829
Bacteroidota
CCT
Arg
>WENV170080398
CDZW01044848
398829
Bacteroidota
CCT
Arg
>WENV170080467
CDZW01047421
398829
Bacteroidota
CCT
Arg
>WENV170079571
CDZW01009563
351598
Bacteroidota
CGG
Pro
>WENV170079724
CDZW01015907
351598
Bacteroidota
CGG
Pro
>WENV170079763
CDZW01018121
351598
Bacteroidota
CGG
Pro
>WENV170080424
CDZW01045526
351598
Bacteroidota
CGG
Pro
>WENV170079346
CDZW01001661
280451
Bacteroidota
CGT
Thr
>WENV170079766
CDZW01018186
398860
Bacteroidota
CTC
Glu
>WENV170080004
CDZW01028287
398860
Bacteroidota
CTC
Glu
>WENV170079764
CDZW01018143
483416
Bacteroidota
CTG
Gln
>WENV170080072
CDZW01030549
483416
Bacteroidota
CTG
Gln
>WENV170080492
CDZW01048611
483416
Bacteroidota
CTG
Gln
>WENV170080362
CDZW01043164
488746
Bacteroidota
CTG
Gln
>WENV170079467
CDZW01005765
480318
Bacteroidota
CTG
Gln
>WENV170079518
CDZW01007872
398836
Bacteroidota
GCA
Cys
>WENV170079821
CDZW01020026
398836
Bacteroidota
GCA
Cys
>WENV170079841
CDZW01020774
398836
Bacteroidota
GCA
Cys
>WENV170080176
CDZW01033630
398836
Bacteroidota
GCA
Cys
>WENV170079765
CDZW01018186
29791
Bacteroidota
GCT
Ser
>WENV170079323
CDZW01000792
20206
Bacteroidota
GGA
Ser
>WENV170079934
CDZW01025079
21127
Bacteroidota
GGA
Ser
>WENV170079369
CDZW01002158
27502
Bacteroidota
GGA
Ser
>WENV170080026
CDZW01029438
27502
Bacteroidota
GGA
Ser
>WENV170080231
CDZW01036243
27502
Bacteroidota
GGA
Ser
>WENV170080132
CDZW01032455
175902
Bacteroidota
GGC
Ala
>WENV170079345
CDZW01001654
183889
Bacteroidota
GGC
Ala
>WENV170080156
CDZW01032866
405877
Bacteroidota
GGT
Thr
>WENV170079468
CDZW01005769
99847
Bacteroidota
GTA
Tyr
>WENV170079653
CDZW01012709
99847
Bacteroidota
GTA
Tyr
>WENV170079755
CDZW01017780
99847
Bacteroidota
GTA
Tyr
>WENV170079853
CDZW01021279
99847
Bacteroidota
GTA
Tyr
>WENV170080421
CDZW01045526
99847
Bacteroidota
GTA
Tyr
>WENV170080092
CDZW01030927
175903
Bacteroidota
GTG
His
>WENV170080010
CDZW01028683
175838
Bacteroidota
GTT
Asn
>WENV170080011
CDZW01028683
175838
Bacteroidota
GTT
Asn
>WENV170080012
CDZW01028683
175838
Bacteroidota
GTT
Asn
>WENV170080417
CDZW01045526
175838
Bacteroidota
GTT
Asn
>WENV170080418
CDZW01045526
175838
Bacteroidota
GTT
Asn
>WENV170080419
CDZW01045526
175838
Bacteroidota
GTT
Asn
>WENV170080148
CDZW01032855
186108
Bacteroidota
GTT
Asn
>WENV170080149
CDZW01032855
186108
Bacteroidota
GTT
Asn
>WENV170080150
CDZW01032855
186108
Bacteroidota
GTT
Asn
>WENV170080151
CDZW01032855
186108
Bacteroidota
GTT
Asn
>WENV170080152
CDZW01032855
186108
Bacteroidota
GTT
Asn
>WENV170080153
CDZW01032855
186108
Bacteroidota
GTT
Asn
>WENV170080154
CDZW01032855
186108
Bacteroidota
GTT
Asn
>WENV170079875
CDZW01022393
56072
Bacteroidota
TAA
Leu
>WENV170079635
CDZW01011999
159415
Bacteroidota
TAC
Val
>WENV170079636
CDZW01011999
159415
Bacteroidota
TAC
Val
>WENV170079637
CDZW01011999
159415
Bacteroidota
TAC
Val
>WENV170080143
CDZW01032766
159415
Bacteroidota
TAC
Val
>WENV170080144
CDZW01032766
159415
Bacteroidota
TAC
Val
>WENV170080238
CDZW01036622
117741
Bacteroidota
TAG
Leu
>WENV170079933
CDZW01024922
176192
Bacteroidota
TCT
Arg
>WENV170080091
CDZW01030927
56493
Bacteroidota
TGA
Ser
>WENV170079849
CDZW01021113
69204
Bacteroidota
TGA
Ser
>WENV170079939
CDZW01025454
69204
Bacteroidota
TGA
Ser
>WENV170080171
CDZW01033607
69204
Bacteroidota
TGA
Ser
>WENV170080369
CDZW01043989
480404
Bacteroidota
TTG
Gln
>WENV170079500
CDZW01006960
484496
Bacteroidota
TTG
Gln
>WENV170079563
CDZW01009480
484496
Bacteroidota
TTG
Gln
>WENV170079727
CDZW01015912
484496
Bacteroidota
TTG
Gln
>WENV170080386
CDZW01044436
484496
Bacteroidota
TTG
Gln
>WENV170080122
CDZW01032056
280446
Bacteroidota
TTT
Lys
>WENV170080013
CDZW01028684
280446
Bacteroidota
TTT
Lys
>WENV170079326
CDZW01000837
365112
Bacteroidota
TTT
Lys
>WENV170079604
CDZW01010733
365112
Bacteroidota
TTT
Lys
>WENV170079810
CDZW01019684
365112
Bacteroidota
TTT
Lys
>WENV170079965
CDZW01026318
365112
Bacteroidota
TTT
Lys
>WENV170080311
CDZW01040116
365112
Bacteroidota
TTT
Lys
>WENV170080361
CDZW01043154
365112
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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