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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
116 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170086218
CEAC01000341
44852
Bacteroidota
TAA
Leu
>WENV170086221
CEAC01000422
17323
Bacteroidota
GGA
Ser
>WENV170086231
CEAC01000956
193809
Bacteroidota
CAT
Met
>WENV170086262
CEAC01002108
95875
Bacteroidota
TAG
Leu
>WENV170086275
CEAC01002232
146530
Bacteroidota
TGT
Thr
>WENV170086291
CEAC01003370
24174
Bacteroidota
GCT
Ser
>WENV170086301
CEAC01003635
141635
Bacteroidota
TAC
Val
>WENV170086302
CEAC01003635
141635
Bacteroidota
TAC
Val
>WENV170086303
CEAC01003635
141635
Bacteroidota
TAC
Val
>WENV170086315
CEAC01004012
235165
Bacteroidota
CCA
Trp
>WENV170086319
CEAC01004044
343138
Bacteroidota
CCT
Arg
>WENV170086327
CEAC01004541
136207
Bacteroidota
TAC
Val
>WENV170086328
CEAC01004541
136207
Bacteroidota
TAC
Val
>WENV170086342
CEAC01005250
144655
Bacteroidota
GGC
Ala
>WENV170086351
CEAC01005616
144656
Bacteroidota
GTG
His
>WENV170086357
CEAC01005975
338132
Bacteroidota
GCA
Cys
>WENV170086363
CEAC01006185
301449
Bacteroidota
CGG
Pro
>WENV170086378
CEAC01006751
147439
Bacteroidota
TCT
Arg
>WENV170086379
CEAC01006798
235097
Bacteroidota
TTT
Lys
>WENV170086382
CEAC01006805
353927
Bacteroidota
TTC
Glu
>WENV170086383
CEAC01006805
353927
Bacteroidota
TTC
Glu
>WENV170086387
CEAC01007117
141414
Bacteroidota
GGG
Pro
>WENV170086397
CEAC01007134
144655
Bacteroidota
GGC
Ala
>WENV170086408
CEAC01007420
126965
Bacteroidota
GGG
Pro
>WENV170086421
CEAC01008057
146761
Bacteroidota
GAT
Ile
>WENV170086429
CEAC01008085
338132
Bacteroidota
GCA
Cys
>WENV170086430
CEAC01008085
338132
Bacteroidota
GCA
Cys
>WENV170086447
CEAC01008712
338124
Bacteroidota
CCG
Arg
>WENV170086466
CEAC01009350
425638
Bacteroidota
CTG
Gln
>WENV170086472
CEAC01009722
303954
Bacteroidota
GCC
Gly
>WENV170086473
CEAC01009722
303954
Bacteroidota
GCC
Gly
>WENV170086477
CEAC01009728
141414
Bacteroidota
GGG
Pro
>WENV170086480
CEAC01009929
151960
Bacteroidota
GGC
Ala
>WENV170086510
CEAC01010368
141414
Bacteroidota
GGG
Pro
>WENV170086535
CEAC01011294
80607
Bacteroidota
GTA
Tyr
>WENV170086571
CEAC01012963
56823
Bacteroidota
TGA
Ser
>WENV170086573
CEAC01012963
113604
Bacteroidota
>WENV170086576
CEAC01012963
113604
Bacteroidota
>WENV170086592
CEAC01013420
46165
Bacteroidota
TGA
Ser
>WENV170086601
CEAC01013899
16220
Bacteroidota
GGA
Ser
>WENV170086603
CEAC01013906
144590
Bacteroidota
GTT
Asn
>WENV170086604
CEAC01013906
144590
Bacteroidota
GTT
Asn
>WENV170086625
CEAC01015112
235207
Bacteroidota
CAT
Met
>WENV170086639
CEAC01015192
144657
Bacteroidota
CGG
Pro
>WENV170086660
CEAC01016016
353927
Bacteroidota
TTC
Glu
>WENV170086666
CEAC01016801
338125
Bacteroidota
CCT
Arg
>WENV170086674
CEAC01017031
436206
Bacteroidota
TTG
Gln
>WENV170086684
CEAC01017444
235097
Bacteroidota
TTT
Lys
>WENV170086687
CEAC01017445
301449
Bacteroidota
CGG
Pro
>WENV170086715
CEAC01019341
17323
Bacteroidota
GGA
Ser
>WENV170086724
CEAC01019879
23696
Bacteroidota
GCT
Ser
>WENV170086725
CEAC01019879
338155
Bacteroidota
CTC
Glu
>WENV170086758
CEAC01020566
155123
Bacteroidota
GTT
Asn
>WENV170086766
CEAC01020926
126966
Bacteroidota
TAC
Val
>WENV170086767
CEAC01020926
126966
Bacteroidota
TAC
Val
>WENV170086785
CEAC01021243
126966
Bacteroidota
TAC
Val
>WENV170086787
CEAC01021244
301449
Bacteroidota
CGG
Pro
>WENV170086801
CEAC01021582
155123
Bacteroidota
GTT
Asn
>WENV170086806
CEAC01021893
338486
Bacteroidota
CAT
Met
>WENV170086808
CEAC01021915
344692
Bacteroidota
GGT
Thr
>WENV170086828
CEAC01022632
235203
Bacteroidota
TTT
Lys
>WENV170086835
CEAC01022649
353927
Bacteroidota
TTC
Glu
>WENV170086846
CEAC01023129
414426
Bacteroidota
CTG
Gln
>WENV170086859
CEAC01023682
436206
Bacteroidota
TTG
Gln
>WENV170086868
CEAC01024159
313363
Bacteroidota
GAA
Phe
>WENV170086875
CEAC01024479
80614
Bacteroidota
>WENV170086903
CEAC01025475
56823
Bacteroidota
TGA
Ser
>WENV170086936
CEAC01027165
59689
Bacteroidota
CAG
Leu
>WENV170086957
CEAC01027762
154643
Bacteroidota
CAT
Met
>WENV170086970
CEAC01028051
113604
Bacteroidota
>WENV170086973
CEAC01028051
113604
Bacteroidota
>WENV170086976
CEAC01028051
113604
Bacteroidota
>WENV170087004
CEAC01028693
144596
Bacteroidota
GGC
Ala
>WENV170087008
CEAC01028743
144590
Bacteroidota
GTT
Asn
>WENV170087009
CEAC01028743
144590
Bacteroidota
GTT
Asn
>WENV170087011
CEAC01028743
80607
Bacteroidota
GTA
Tyr
>WENV170087022
CEAC01028835
58715
Bacteroidota
GAG
Leu
>WENV170087063
CEAC01029749
338486
Bacteroidota
CAT
Met
>WENV170087081
CEAC01030520
56823
Bacteroidota
TGA
Ser
>WENV170087089
CEAC01030818
95559
Bacteroidota
TAG
Leu
>WENV170087104
CEAC01031406
154643
Bacteroidota
CAT
Met
>WENV170087115
CEAC01031702
267954
Bacteroidota
GCC
Gly
>WENV170087116
CEAC01031702
267954
Bacteroidota
GCC
Gly
>WENV170087120
CEAC01032054
126966
Bacteroidota
TAC
Val
>WENV170087131
CEAC01032366
235097
Bacteroidota
TTT
Lys
>WENV170087132
CEAC01032375
436206
Bacteroidota
TTG
Gln
>WENV170087162
CEAC01033861
301449
Bacteroidota
CGG
Pro
>WENV170087170
CEAC01034338
155123
Bacteroidota
GTT
Asn
>WENV170087171
CEAC01034338
155123
Bacteroidota
GTT
Asn
>WENV170087172
CEAC01034338
155123
Bacteroidota
GTT
Asn
>WENV170087175
CEAC01034360
144639
Bacteroidota
GGC
Ala
>WENV170087205
CEAC01035659
145504
Bacteroidota
TGT
Thr
>WENV170087215
CEAC01036288
56823
Bacteroidota
TGA
Ser
>WENV170087225
CEAC01036294
243025
Bacteroidota
CAT
Met
>WENV170087236
CEAC01036663
235102
Bacteroidota
CGT
Thr
>WENV170087244
CEAC01036670
44852
Bacteroidota
TAA
Leu
>WENV170087245
CEAC01036670
338125
Bacteroidota
CCT
Arg
>WENV170087259
CEAC01037079
126641
Bacteroidota
TAC
Val
>WENV170087262
CEAC01037407
235207
Bacteroidota
CAT
Met
>WENV170087269
CEAC01037410
136207
Bacteroidota
TAC
Val
>WENV170087270
CEAC01037410
136207
Bacteroidota
TAC
Val
>WENV170087280
CEAC01037762
56823
Bacteroidota
TGA
Ser
>WENV170087289
CEAC01038146
267954
Bacteroidota
GCC
Gly
>WENV170087293
CEAC01038700
243025
Bacteroidota
CAT
Met
>WENV170087305
CEAC01039239
141414
Bacteroidota
GGG
Pro
>WENV170087307
CEAC01039500
235203
Bacteroidota
TTT
Lys
>WENV170087321
CEAC01040121
235207
Bacteroidota
CAT
Met
>WENV170087322
CEAC01040121
235207
Bacteroidota
CAT
Met
>WENV170087339
CEAC01040485
144639
Bacteroidota
GGC
Ala
>WENV170087348
CEAC01040836
150485
Bacteroidota
GTT
Asn
>WENV170087349
CEAC01040836
150485
Bacteroidota
GTT
Asn
>WENV170087350
CEAC01040836
150485
Bacteroidota
GTT
Asn
>WENV170087351
CEAC01040836
150485
Bacteroidota
GTT
Asn
>WENV170087352
CEAC01040837
153993
Bacteroidota
GAT
Ile
>WENV170087369
CEAC01041220
144656
Bacteroidota
GTG
His
>WENV170087370
CEAC01041220
16224
Bacteroidota
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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