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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
78 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170108265
CECA01020270
117741
Bacteroidota
TAG
Leu
>WENV170109146
CECA01064344
398829
Bacteroidota
CCT
Arg
>WENV170108168
CECA01014797
404226
Bacteroidota
CCT
Arg
>WENV170108150
CECA01014425
175904
Bacteroidota
CGG
Pro
>WENV170108892
CECA01052012
175904
Bacteroidota
CGG
Pro
>WENV170108374
CECA01026866
289031
Bacteroidota
CAT
Met
>WENV170108073
CECA01009907
280553
Bacteroidota
TTT
Lys
>WENV170108476
CECA01031233
280553
Bacteroidota
TTT
Lys
>WENV170108975
CECA01055675
280553
Bacteroidota
TTT
Lys
>WENV170109136
CECA01063878
280553
Bacteroidota
TTT
Lys
>WENV170108275
CECA01020818
280557
Bacteroidota
CAT
Met
>WENV170109185
CECA01067829
280557
Bacteroidota
CAT
Met
>WENV170109244
CECA01070402
483416
Bacteroidota
CTG
Gln
>WENV170108169
CECA01014797
398871
Bacteroidota
TTC
Glu
>WENV170108170
CECA01014797
398871
Bacteroidota
TTC
Glu
>WENV170108713
CECA01043215
222068
Bacteroidota
GAT
Ile
>WENV170109351
CECA01074587
175906
Bacteroidota
GTG
His
>WENV170109352
CECA01074587
175906
Bacteroidota
GTG
His
>WENV170109176
CECA01066717
351598
Bacteroidota
CGG
Pro
>WENV170108973
CECA01055675
118089
Bacteroidota
TAG
Leu
>WENV170109365
CECA01075242
118089
Bacteroidota
TAG
Leu
>WENV170108151
CECA01014425
280530
Bacteroidota
CCA
Trp
>WENV170108893
CECA01052012
280530
Bacteroidota
CCA
Trp
>WENV170108424
CECA01029331
203954
Bacteroidota
GTC
Asp
>WENV170109262
CECA01071034
203954
Bacteroidota
GTC
Asp
>WENV170109263
CECA01071034
203954
Bacteroidota
GTC
Asp
>WENV170109264
CECA01071034
203954
Bacteroidota
GTC
Asp
>WENV170109265
CECA01071034
203954
Bacteroidota
GTC
Asp
>WENV170108498
CECA01032529
157895
Bacteroidota
TAC
Val
>WENV170108499
CECA01032529
157895
Bacteroidota
TAC
Val
>WENV170108500
CECA01032529
157895
Bacteroidota
TAC
Val
>WENV170108191
CECA01016596
178907
Bacteroidota
TCT
Arg
>WENV170107936
CECA01000650
182267
Bacteroidota
GTT
Asn
>WENV170108449
CECA01029976
20449
Bacteroidota
GGA
Ser
>WENV170108895
CECA01052012
20449
Bacteroidota
GGA
Ser
>WENV170109279
CECA01071092
20449
Bacteroidota
GGA
Ser
>WENV170109313
CECA01072214
21127
Bacteroidota
GGA
Ser
>WENV170108172
CECA01015240
175886
Bacteroidota
GGC
Ala
>WENV170108209
CECA01017825
280451
Bacteroidota
CGT
Thr
>WENV170108262
CECA01020165
280451
Bacteroidota
CGT
Thr
>WENV170109316
CECA01072450
406320
Bacteroidota
TTC
Glu
>WENV170108075
CECA01009907
399200
Bacteroidota
CAT
Met
>WENV170108545
CECA01035575
399200
Bacteroidota
CAT
Met
>WENV170109138
CECA01063878
399200
Bacteroidota
CAT
Met
>WENV170109312
CECA01072177
399200
Bacteroidota
CAT
Met
>WENV170109371
CECA01075670
399200
Bacteroidota
CAT
Met
>WENV170108323
CECA01023780
186874
Bacteroidota
CAT
Met
>WENV170108612
CECA01038938
186874
Bacteroidota
CAT
Met
>WENV170108962
CECA01055203
186874
Bacteroidota
CAT
Met
>WENV170108286
CECA01022395
488746
Bacteroidota
CTG
Gln
>WENV170109017
CECA01057363
280478
Bacteroidota
GCC
Gly
>WENV170108115
CECA01012888
280478
Bacteroidota
GCC
Gly
>WENV170108117
CECA01012888
280478
Bacteroidota
GCC
Gly
>WENV170108119
CECA01012888
280478
Bacteroidota
GCC
Gly
>WENV170108231
CECA01019086
280478
Bacteroidota
GCC
Gly
>WENV170108659
CECA01040267
280478
Bacteroidota
GCC
Gly
>WENV170108661
CECA01040267
280478
Bacteroidota
GCC
Gly
>WENV170108974
CECA01055675
73011
Bacteroidota
CAA
Leu
>WENV170108153
CECA01014425
74084
Bacteroidota
CAG
Leu
>WENV170108899
CECA01052012
74084
Bacteroidota
CAG
Leu
>WENV170109169
CECA01066702
480325
Bacteroidota
CTG
Gln
>WENV170108457
CECA01030220
176192
Bacteroidota
TCT
Arg
>WENV170109260
CECA01071034
400088
Bacteroidota
GGT
Thr
>WENV170109168
CECA01066225
69204
Bacteroidota
TGA
Ser
>WENV170108807
CECA01046919
280446
Bacteroidota
TTT
Lys
>WENV170108943
CECA01054570
280446
Bacteroidota
TTT
Lys
>WENV170107994
CECA01004144
484496
Bacteroidota
TTG
Gln
>WENV170108031
CECA01006452
27502
Bacteroidota
GGA
Ser
>WENV170109245
CECA01070403
27502
Bacteroidota
GGA
Ser
>WENV170109254
CECA01070945
285750
Bacteroidota
CCC
Gly
>WENV170109280
CECA01071155
285750
Bacteroidota
CCC
Gly
>WENV170108458
CECA01030401
398836
Bacteroidota
GCA
Cys
>WENV170109040
CECA01059122
398836
Bacteroidota
GCA
Cys
>WENV170109171
CECA01066702
398836
Bacteroidota
GCA
Cys
>WENV170108533
CECA01034352
170323
Bacteroidota
GGG
Pro
>WENV170108746
CECA01044883
170323
Bacteroidota
GGG
Pro
>WENV170109214
CECA01069689
170323
Bacteroidota
GGG
Pro
>WENV170109267
CECA01071038
170323
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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