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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170149340
CEOC01021796
400818
Bacteroidota
TTC
Glu
>WENV170149443
CEOC01029128
400818
Bacteroidota
TTC
Glu
>WENV170149463
CEOC01030384
400818
Bacteroidota
TTC
Glu
>WENV170149668
CEOC01047121
288475
Bacteroidota
GCC
Gly
>WENV170149794
CEOC01056480
156605
Bacteroidota
GAC
Val
>WENV170149198
CEOC01008711
320084
Bacteroidota
TTT
Lys
>WENV170149329
CEOC01020533
305664
Bacteroidota
CAT
Met
>WENV170149351
CEOC01022973
320669
Bacteroidota
GAA
Phe
>WENV170149231
CEOC01011925
155808
Bacteroidota
TGG
Pro
>WENV170149963
CEOC01070233
155808
Bacteroidota
TGG
Pro
>WENV170149127
CEOC01003693
197494
Bacteroidota
GTC
Asp
>WENV170149781
CEOC01055174
21789
Bacteroidota
GGA
Ser
>WENV170149159
CEOC01005808
483389
Bacteroidota
GCA
Cys
>WENV170150037
CEOC01078306
182234
Bacteroidota
TGT
Thr
>WENV170150134
CEOC01088969
182234
Bacteroidota
TGT
Thr
>WENV170149902
CEOC01066327
296664
Bacteroidota
GAA
Phe
>WENV170149817
CEOC01057829
56162
Bacteroidota
TGA
Ser
>WENV170150912
CEOC01166151
56162
Bacteroidota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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