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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170154101
CEOF01171051
273835
Bacteroidota
GTT
Asn
>WENV170154287
CEOF01190132
273835
Bacteroidota
GTT
Asn
>WENV170154672
CEOF01213143
653934
Bacteroidota
TTC
Glu
>WENV170153455
CEOF01095178
456728
Bacteroidota
CAT
Met
>WENV170152895
CEOF01039288
271717
Bacteroidota
GTC
Asp
>WENV170154161
CEOF01176957
271717
Bacteroidota
GTC
Asp
>WENV170152630
CEOF01017618
456414
Bacteroidota
GAA
Phe
>WENV170154373
CEOF01196640
456414
Bacteroidota
GAA
Phe
>WENV170154412
CEOF01199890
456414
Bacteroidota
GAA
Phe
>WENV170154428
CEOF01201034
456414
Bacteroidota
GAA
Phe
>WENV170154476
CEOF01203969
456414
Bacteroidota
GAA
Phe
>WENV170153151
CEOF01060833
241614
Bacteroidota
GAC
Val
>WENV170152498
CEOF01007973
452741
Bacteroidota
TCC
Gly
>WENV170152585
CEOF01014327
452487
Bacteroidota
CCA
Trp
>WENV170153026
CEOF01049343
452487
Bacteroidota
CCA
Trp
>WENV170153226
CEOF01069291
452487
Bacteroidota
CCA
Trp
>WENV170153237
CEOF01070691
457615
Bacteroidota
TTT
Lys
>WENV170153616
CEOF01113899
272122
Bacteroidota
GTC
Asp
>WENV170153867
CEOF01143528
272122
Bacteroidota
GTC
Asp
>WENV170154248
CEOF01186768
272122
Bacteroidota
GTC
Asp
>WENV170152480
CEOF01006052
655825
Bacteroidota
TTC
Glu
>WENV170152552
CEOF01011819
655825
Bacteroidota
TTC
Glu
>WENV170153318
CEOF01079934
459901
Bacteroidota
CCA
Trp
>WENV170153478
CEOF01097677
280824
Bacteroidota
TGC
Ala
>WENV170154607
CEOF01210845
241634
Bacteroidota
TGG
Pro
>WENV170152635
CEOF01018094
296838
Bacteroidota
GAT
Ile
>WENV170153614
CEOF01113777
278725
Bacteroidota
GTT
Asn
>WENV170153782
CEOF01132322
278725
Bacteroidota
GTT
Asn
>WENV170153362
CEOF01084816
277953
Bacteroidota
GTC
Asp
>WENV170154700
CEOF01213729
86958
Bacteroidota
TGA
Ser
>WENV170153847
CEOF01141223
240683
Bacteroidota
TGG
Pro
>WENV170154622
CEOF01211498
240683
Bacteroidota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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