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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
35 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170152480
CEOF01006052
400818
Bacteroidota
TTC
Glu
>WENV170152552
CEOF01011819
400818
Bacteroidota
TTC
Glu
>WENV170152957
CEOF01044118
198599
Bacteroidota
GTG
His
>WENV170153151
CEOF01060833
156605
Bacteroidota
GAC
Val
>WENV170153447
CEOF01094147
156605
Bacteroidota
GAC
Val
>WENV170154095
CEOF01170550
156605
Bacteroidota
GAC
Val
>WENV170153649
CEOF01117521
320084
Bacteroidota
TTT
Lys
>WENV170152630
CEOF01017618
320669
Bacteroidota
GAA
Phe
>WENV170154373
CEOF01196640
320669
Bacteroidota
GAA
Phe
>WENV170154412
CEOF01199890
320669
Bacteroidota
GAA
Phe
>WENV170154428
CEOF01201034
320669
Bacteroidota
GAA
Phe
>WENV170154476
CEOF01203969
320669
Bacteroidota
GAA
Phe
>WENV170153847
CEOF01141223
155808
Bacteroidota
TGG
Pro
>WENV170154622
CEOF01211498
155808
Bacteroidota
TGG
Pro
>WENV170153502
CEOF01100466
121312
Bacteroidota
TAG
Leu
>WENV170154322
CEOF01192780
121312
Bacteroidota
TAG
Leu
>WENV170154313
CEOF01191863
483389
Bacteroidota
GCA
Cys
>WENV170153237
CEOF01070691
286857
Bacteroidota
TTT
Lys
>WENV170153362
CEOF01084816
193718
Bacteroidota
GTC
Asp
>WENV170154215
CEOF01182190
193718
Bacteroidota
GTC
Asp
>WENV170154375
CEOF01196912
21872
Bacteroidota
GGA
Ser
>WENV170153614
CEOF01113777
181598
Bacteroidota
GTT
Asn
>WENV170153782
CEOF01132322
181598
Bacteroidota
GTT
Asn
>WENV170154101
CEOF01171051
181598
Bacteroidota
GTT
Asn
>WENV170154287
CEOF01190132
181598
Bacteroidota
GTT
Asn
>WENV170153455
CEOF01095178
284409
Bacteroidota
CAT
Met
>WENV170153478
CEOF01097677
183480
Bacteroidota
TGC
Ala
>WENV170154619
CEOF01211359
179598
Bacteroidota
CAT
Met
>WENV170154672
CEOF01213143
399343
Bacteroidota
TTC
Glu
>WENV170152782
CEOF01029207
56162
Bacteroidota
TGA
Ser
>WENV170153127
CEOF01057276
56162
Bacteroidota
TGA
Ser
>WENV170154700
CEOF01213729
56162
Bacteroidota
TGA
Ser
>WENV170152948
CEOF01043326
480568
Bacteroidota
GCA
Cys
>WENV170154360
CEOF01196008
480568
Bacteroidota
GCA
Cys
>WENV170154303
CEOF01191108
179695
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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