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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170155254
CEOG01006373
145507
Bacteroidota
TCT
Arg
>WENV170155430
CEOG01029878
338625
Bacteroidota
TTC
Glu
>WENV170155510
CEOG01037175
147106
Bacteroidota
CAT
Met
>WENV170155512
CEOG01037201
127458
Bacteroidota
GAC
Val
>WENV170155518
CEOG01037395
238553
Bacteroidota
GAA
Phe
>WENV170155525
CEOG01037587
17987
Bacteroidota
GGA
Ser
>WENV170155526
CEOG01037605
255845
Bacteroidota
>WENV170155531
CEOG01037692
193627
Bacteroidota
TCT
Arg
>WENV170155538
CEOG01037785
172532
Bacteroidota
GTC
Asp
>WENV170155539
CEOG01037802
236929
Bacteroidota
TTT
Lys
>WENV170155543
CEOG01037825
97383
Bacteroidota
CAA
Leu
>WENV170155545
CEOG01037849
165001
Bacteroidota
GTT
Asn
>WENV170155712
CEOG01102220
308806
Bacteroidota
TCC
Gly
>WENV170155733
CEOG01104817
150454
Bacteroidota
TGT
Thr
>WENV170155734
CEOG01104817
101289
Bacteroidota
GTA
Tyr
>WENV170155759
CEOG01106910
146962
Bacteroidota
CAT
Met
>WENV170155760
CEOG01107316
267483
Bacteroidota
TGT
Thr
>WENV170155773
CEOG01108226
152188
Bacteroidota
GGC
Ala
>WENV170155784
CEOG01108559
45130
Bacteroidota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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