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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170155734
CEOG01104817
120026
Bacteroidota
GTA
Tyr
>WENV170155512
CEOG01037201
156605
Bacteroidota
GAC
Val
>WENV170155530
CEOG01037692
156756
Bacteroidota
TGG
Pro
>WENV170155526
CEOG01037605
303411
Bacteroidota
>WENV170155712
CEOG01102220
364431
Bacteroidota
TCC
Gly
>WENV170155539
CEOG01037802
282369
Bacteroidota
TTT
Lys
>WENV170155273
CEOG01008446
291910
Bacteroidota
TTG
Gln
>WENV170155733
CEOG01104817
177083
Bacteroidota
TGT
Thr
>WENV170155545
CEOG01037849
227539
Bacteroidota
GTT
Asn
>WENV170155510
CEOG01037175
178527
Bacteroidota
CAT
Met
>WENV170155513
CEOG01037244
338178
Bacteroidota
CAT
Met
>WENV170155531
CEOG01037692
231584
Bacteroidota
TCT
Arg
>WENV170155773
CEOG01108226
231598
Bacteroidota
GGC
Ala
>WENV170155538
CEOG01037785
206043
Bacteroidota
GTC
Asp
>WENV170155518
CEOG01037395
296664
Bacteroidota
GAA
Phe
>WENV170155713
CEOG01102220
408604
Bacteroidota
GGT
Thr
>WENV170155430
CEOG01029878
399343
Bacteroidota
TTC
Glu
>WENV170155759
CEOG01106910
178366
Bacteroidota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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