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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
50 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170167600
CEOP01023742
400818
Bacteroidota
TTC
Glu
>WENV170169395
CEOP01198418
400818
Bacteroidota
TTC
Glu
>WENV170169877
CEOP01243264
400818
Bacteroidota
TTC
Glu
>WENV170170145
CEOP01364373
198599
Bacteroidota
GTG
His
>WENV170169422
CEOP01202054
281538
Bacteroidota
GAA
Phe
>WENV170169951
CEOP01247113
156605
Bacteroidota
GAC
Val
>WENV170167701
CEOP01031988
364431
Bacteroidota
TCC
Gly
>WENV170168436
CEOP01089906
364431
Bacteroidota
TCC
Gly
>WENV170168481
CEOP01093905
364431
Bacteroidota
TCC
Gly
>WENV170169487
CEOP01209075
364431
Bacteroidota
TCC
Gly
>WENV170167744
CEOP01034210
240785
Bacteroidota
GTC
Asp
>WENV170169335
CEOP01190598
240785
Bacteroidota
GTC
Asp
>WENV170169722
CEOP01233035
240785
Bacteroidota
GTC
Asp
>WENV170167617
CEOP01025365
155808
Bacteroidota
TGG
Pro
>WENV170169150
CEOP01165456
155808
Bacteroidota
TGG
Pro
>WENV170169489
CEOP01209471
155808
Bacteroidota
TGG
Pro
>WENV170169829
CEOP01241156
155808
Bacteroidota
TGG
Pro
>WENV170167417
CEOP01008970
155808
Bacteroidota
TGG
Pro
>WENV170169002
CEOP01148537
21789
Bacteroidota
GGA
Ser
>WENV170168397
CEOP01086025
121312
Bacteroidota
TAG
Leu
>WENV170167729
CEOP01033526
227539
Bacteroidota
GTT
Asn
>WENV170168484
CEOP01094041
227539
Bacteroidota
GTT
Asn
>WENV170168923
CEOP01138983
227539
Bacteroidota
GTT
Asn
>WENV170169391
CEOP01197717
227539
Bacteroidota
GTT
Asn
>WENV170170238
CEOP01422051
344563
Bacteroidota
TTG
Gln
>WENV170168372
CEOP01083260
299065
Bacteroidota
TTG
Gln
>WENV170168973
CEOP01144326
299065
Bacteroidota
TTG
Gln
>WENV170169975
CEOP01247630
299065
Bacteroidota
TTG
Gln
>WENV170167903
CEOP01046714
193718
Bacteroidota
GTC
Asp
>WENV170169383
CEOP01196975
117927
Bacteroidota
TAG
Leu
>WENV170167309
CEOP01001298
347386
Bacteroidota
CCA
Trp
>WENV170167573
CEOP01021466
347386
Bacteroidota
CCA
Trp
>WENV170168118
CEOP01063241
347386
Bacteroidota
CCA
Trp
>WENV170168957
CEOP01142788
347386
Bacteroidota
CCA
Trp
>WENV170169719
CEOP01232909
347386
Bacteroidota
CCA
Trp
>WENV170168360
CEOP01081953
206043
Bacteroidota
GTC
Asp
>WENV170168409
CEOP01087264
183480
Bacteroidota
TGC
Ala
>WENV170168344
CEOP01080009
24958
Bacteroidota
GGA
Ser
>WENV170167557
CEOP01020867
361792
Bacteroidota
GAA
Phe
>WENV170167650
CEOP01028466
361792
Bacteroidota
GAA
Phe
>WENV170167868
CEOP01043795
361792
Bacteroidota
GAA
Phe
>WENV170169563
CEOP01216817
361792
Bacteroidota
GAA
Phe
>WENV170167511
CEOP01015941
179598
Bacteroidota
CAT
Met
>WENV170168224
CEOP01071280
179598
Bacteroidota
CAT
Met
>WENV170168518
CEOP01097585
56162
Bacteroidota
TGA
Ser
>WENV170169587
CEOP01219049
56162
Bacteroidota
TGA
Ser
>WENV170168104
CEOP01062495
56162
Bacteroidota
TGA
Ser
>WENV170168105
CEOP01062808
56162
Bacteroidota
TGA
Ser
>WENV170168480
CEOP01093829
56162
Bacteroidota
TGA
Ser
>WENV170169963
CEOP01247377
299085
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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