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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170177025
CEOS01149882
191838
Bacteroidota
CAT
Met
>WENV170176277
CEOS01056951
198599
Bacteroidota
GTG
His
>WENV170176378
CEOS01070181
198599
Bacteroidota
GTG
His
>WENV170176879
CEOS01134130
209752
Bacteroidota
GGC
Ala
>WENV170175916
CEOS01018711
23370
Bacteroidota
GGA
Ser
>WENV170176529
CEOS01088971
281190
Bacteroidota
CAT
Met
>WENV170176848
CEOS01130969
203954
Bacteroidota
GTC
Asp
>WENV170176660
CEOS01107198
291910
Bacteroidota
TTG
Gln
>WENV170175942
CEOS01021078
74253
Bacteroidota
GCT
Ser
>WENV170176579
CEOS01095985
155807
Bacteroidota
GAC
Val
>WENV170176672
CEOS01108697
299065
Bacteroidota
TTG
Gln
>WENV170176895
CEOS01136952
299065
Bacteroidota
TTG
Gln
>WENV170176994
CEOS01144939
299065
Bacteroidota
TTG
Gln
>WENV170176832
CEOS01128274
483389
Bacteroidota
GCA
Cys
>WENV170175769
CEOS01005614
286857
Bacteroidota
TTT
Lys
>WENV170176408
CEOS01072582
21872
Bacteroidota
GGA
Ser
>WENV170176824
CEOS01127742
299032
Bacteroidota
GCC
Gly
>WENV170176900
CEOS01137112
282832
Bacteroidota
TTG
Gln
>WENV170176627
CEOS01101529
284409
Bacteroidota
CAT
Met
>WENV170175929
CEOS01020083
206043
Bacteroidota
GTC
Asp
>WENV170176959
CEOS01142145
118418
Bacteroidota
TAG
Leu
>WENV170176732
CEOS01117168
404652
Bacteroidota
CCT
Arg
>WENV170176468
CEOS01081148
177901
Bacteroidota
GTT
Asn
>WENV170175954
CEOS01022586
399343
Bacteroidota
TTC
Glu
>WENV170175955
CEOS01022586
399343
Bacteroidota
TTC
Glu
>WENV170176801
CEOS01125036
299085
Bacteroidota
TTT
Lys
>WENV170176885
CEOS01135259
183378
Bacteroidota
GGC
Ala
>WENV170176752
CEOS01120102
179695
Bacteroidota
GGG
Pro
>WENV170177210
CEOS01223540
179695
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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