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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170180074
CEOW01048894
400818
Bacteroidota
TTC
Glu
>WENV170180460
CEOW01097705
400818
Bacteroidota
TTC
Glu
>WENV170179918
CEOW01031391
281538
Bacteroidota
GAA
Phe
>WENV170179835
CEOW01024587
156605
Bacteroidota
GAC
Val
>WENV170180274
CEOW01072759
320084
Bacteroidota
TTT
Lys
>WENV170180292
CEOW01074716
320084
Bacteroidota
TTT
Lys
>WENV170180018
CEOW01042822
402171
Bacteroidota
TTC
Glu
>WENV170181359
CEOW01269074
121312
Bacteroidota
TAG
Leu
>WENV170180935
CEOW01143653
483389
Bacteroidota
GCA
Cys
>WENV170180113
CEOW01052575
181598
Bacteroidota
GTT
Asn
>WENV170180099
CEOW01051595
284409
Bacteroidota
CAT
Met
>WENV170179824
CEOW01023349
182234
Bacteroidota
TGT
Thr
>WENV170180124
CEOW01053585
183480
Bacteroidota
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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