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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170260497
CEQZ01053312
400818
Bacteroidota
TTC
Glu
>WENV170260476
CEQZ01050285
179597
Bacteroidota
GTG
His
>WENV170260523
CEQZ01056466
156076
Bacteroidota
TAC
Val
>WENV170260496
CEQZ01053188
209752
Bacteroidota
GGC
Ala
>WENV170260504
CEQZ01054576
179596
Bacteroidota
GGG
Pro
>WENV170260527
CEQZ01056881
366169
Bacteroidota
GAA
Phe
>WENV170260439
CEQZ01039111
15274
Bacteroidota
GCT
Ser
>WENV170260507
CEQZ01054824
156596
Bacteroidota
TAC
Val
>WENV170260413
CEQZ01025823
299065
Bacteroidota
TTG
Gln
>WENV170260474
CEQZ01049709
183856
Bacteroidota
CAT
Met
>WENV170260526
CEQZ01056759
56162
Bacteroidota
TGA
Ser
>WENV170260514
CEQZ01055662
74874
Bacteroidota
GAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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