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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170478565
CEVK01065772
411784
Bacteroidota
GCA
Cys
>WENV170478927
CEVK01107504
147880
Bacteroidota
GGC
Ala
>WENV170478865
CEVK01102395
416430
Bacteroidota
GCA
Cys
>WENV170478298
CEVK01033616
361294
Bacteroidota
GGT
Thr
>WENV170478539
CEVK01062469
172532
Bacteroidota
GTC
Asp
>WENV170478879
CEVK01104272
172532
Bacteroidota
GTC
Asp
>WENV170478946
CEVK01107737
172532
Bacteroidota
GTC
Asp
>WENV170478944
CEVK01107705
103881
Bacteroidota
TAG
Leu
>WENV170478894
CEVK01105270
154388
Bacteroidota
GTG
His
>WENV170478801
CEVK01096161
236125
Bacteroidota
GAA
Phe
>WENV170478620
CEVK01073820
236125
Bacteroidota
GAA
Phe
>WENV170478501
CEVK01057445
236125
Bacteroidota
GAA
Phe
>WENV170478420
CEVK01047506
127458
Bacteroidota
GAC
Val
>WENV170478297
CEVK01033616
322068
Bacteroidota
TCC
Gly
>WENV170478789
CEVK01094354
320640
Bacteroidota
TTG
Gln
>WENV170478573
CEVK01066986
320640
Bacteroidota
TTG
Gln
>WENV170478499
CEVK01057304
320640
Bacteroidota
TTG
Gln
>WENV170478491
CEVK01056874
320640
Bacteroidota
TTG
Gln
>WENV170478386
CEVK01042897
17496
Bacteroidota
GGA
Ser
>WENV170478504
CEVK01057553
139565
Bacteroidota
TGG
Pro
>WENV170479262
CEVK01214313
148135
Bacteroidota
GGG
Pro
>WENV170478910
CEVK01106067
165044
Bacteroidota
GTG
His
>WENV170478920
CEVK01107105
240901
Bacteroidota
TTT
Lys
>WENV170478104
CEVK01012303
240901
Bacteroidota
TTT
Lys
>WENV170478044
CEVK01005458
240901
Bacteroidota
TTT
Lys
>WENV170478043
CEVK01005458
240901
Bacteroidota
TTT
Lys
>WENV170478159
CEVK01017910
185921
Bacteroidota
GTC
Asp
>WENV170478773
CEVK01091182
166633
Bacteroidota
GGC
Ala
>WENV170478594
CEVK01069547
179613
Bacteroidota
CAT
Met
>WENV170478333
CEVK01035992
179613
Bacteroidota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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