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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
52 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>ENV001528
AY933616
222068
Bacteroidota
GAT
Ile
>ENV001530
AY933617
222068
Bacteroidota
GAT
Ile
>ENV001532
AY933618
222068
Bacteroidota
GAT
Ile
>ENV001534
AY933619
222068
Bacteroidota
GAT
Ile
>ENV001538
AY933621
222068
Bacteroidota
GAT
Ile
>ENV001540
AY933622
222068
Bacteroidota
GAT
Ile
>ENV001542
AY933623
222068
Bacteroidota
GAT
Ile
>ENV003187
DQ009108
222068
Bacteroidota
GAT
Ile
>ENV003189
DQ009109
222068
Bacteroidota
GAT
Ile
>ENV003191
DQ009110
222068
Bacteroidota
GAT
Ile
>ENV003193
DQ009111
222068
Bacteroidota
GAT
Ile
>ENV003195
DQ009112
222068
Bacteroidota
GAT
Ile
>ENV003197
DQ009113
222068
Bacteroidota
GAT
Ile
>ENV003731
DQ009434
222068
Bacteroidota
GAT
Ile
>ENV005362
EU062567
56493
Bacteroidota
TGA
Ser
>ENV005380
EU064307
56493
Bacteroidota
TGA
Ser
>ENV005324
EU058573
20449
Bacteroidota
GGA
Ser
>ENV005371
EU063624
178133
Bacteroidota
GAT
Ile
>ENV005410
EU067481
56072
Bacteroidota
TAA
Leu
>ENV005416
EU067686
57807
Bacteroidota
TGA
Ser
>ENV000369
AF422493
185890
Bacteroidota
TGC
Ala
>ENV000952
AY212800
336000
Bacteroidota
CAT
Met
>ENV005367
EU063295
418894
Bacteroidota
TTC
Glu
>ENV005381
EU064912
418894
Bacteroidota
TTC
Glu
>ENV005382
EU064912
418894
Bacteroidota
TTC
Glu
>ENV005366
EU063101
186874
Bacteroidota
CAT
Met
>ENV005398
EU066668
180199
Bacteroidota
CAT
Met
>ENV005383
EU065184
189252
Bacteroidota
GGC
Ala
>ENV000731
AJ937771
365090
Bacteroidota
TTT
Lys
>ENV005397
EU066570
228511
Bacteroidota
GAT
Ile
>ENV005393
EU066106
158068
Bacteroidota
GGG
Pro
>ENV001508
AY933605
233847
Bacteroidota
TGC
Ala
>ENV001510
AY933606
233847
Bacteroidota
TGC
Ala
>ENV003140
DQ009083
233847
Bacteroidota
TGC
Ala
>ENV003164
DQ009096
233847
Bacteroidota
TGC
Ala
>ENV003659
DQ009390
233847
Bacteroidota
TGC
Ala
>ENV003671
DQ009396
233847
Bacteroidota
TGC
Ala
>ENV003202
DQ009115
183480
Bacteroidota
TGC
Ala
>ENV003665
DQ009393
183480
Bacteroidota
TGC
Ala
>ENV004062
DQ295241
183480
Bacteroidota
TGC
Ala
>ENV001469
AY933586
192374
Bacteroidota
GAT
Ile
>ENV001493
AY933598
192374
Bacteroidota
GAT
Ile
>ENV001514
AY933609
192374
Bacteroidota
GAT
Ile
>ENV001518
AY933611
192374
Bacteroidota
GAT
Ile
>ENV001520
AY933612
192374
Bacteroidota
GAT
Ile
>ENV001524
AY933614
192374
Bacteroidota
GAT
Ile
>ENV001536
AY933620
192374
Bacteroidota
GAT
Ile
>ENV001562
AY933633
192374
Bacteroidota
GAT
Ile
>ENV001564
AY933634
192374
Bacteroidota
GAT
Ile
>ENV002960
AY934393
192374
Bacteroidota
GAT
Ile
>ENV003203
DQ009116
192374
Bacteroidota
GAT
Ile
>ENV005408
EU067437
365112
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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