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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
68 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180409073
OBUU01000001
338125
Bacteroidota
CCT
Arg
>WENV180409075
OBUU01000003
95875
Bacteroidota
TAG
Leu
>WENV180409080
OBUU01000005
80614
Bacteroidota
>WENV180409081
OBUU01000005
339341
Bacteroidota
GGT
Thr
>WENV180409082
OBUU01000005
235180
Bacteroidota
CCA
Trp
>WENV180409084
OBUU01000007
80607
Bacteroidota
GTA
Tyr
>WENV180409085
OBUU01000008
343138
Bacteroidota
CCT
Arg
>WENV180409086
OBUU01000008
235129
Bacteroidota
GCC
Gly
>WENV180409088
OBUU01000008
235129
Bacteroidota
GCC
Gly
>WENV180409092
OBUU01000008
338164
Bacteroidota
TTC
Glu
>WENV180409093
OBUU01000008
338164
Bacteroidota
TTC
Glu
>WENV180409096
OBUU01000009
338486
Bacteroidota
CAT
Met
>WENV180409097
OBUU01000012
240012
Bacteroidota
CCC
Gly
>WENV180409098
OBUU01000012
147439
Bacteroidota
TCT
Arg
>WENV180409099
OBUU01000013
185921
Bacteroidota
GTC
Asp
>WENV180409100
OBUU01000013
185921
Bacteroidota
GTC
Asp
>WENV180409102
OBUU01000016
238121
Bacteroidota
CTT
Lys
>WENV180409103
OBUU01000016
238121
Bacteroidota
CTT
Lys
>WENV180409104
OBUU01000016
45423
Bacteroidota
TGA
Ser
>WENV180409105
OBUU01000016
46165
Bacteroidota
TGA
Ser
>WENV180409108
OBUU01000017
80614
Bacteroidota
>WENV180409110
OBUU01000020
338124
Bacteroidota
CCG
Arg
>WENV180409112
OBUU01000022
59689
Bacteroidota
CAG
Leu
>WENV180409115
OBUU01000022
144657
Bacteroidota
CGG
Pro
>WENV180409116
OBUU01000022
235180
Bacteroidota
CCA
Trp
>WENV180409120
OBUU01000025
235129
Bacteroidota
GCC
Gly
>WENV180409121
OBUU01000025
59689
Bacteroidota
CAG
Leu
>WENV180409122
OBUU01000025
58715
Bacteroidota
GAG
Leu
>WENV180409123
OBUU01000030
132360
Bacteroidota
GGG
Pro
>WENV180409124
OBUU01000031
411550
Bacteroidota
CTG
Gln
>WENV180409125
OBUU01000031
411550
Bacteroidota
CTG
Gln
>WENV180409127
OBUU01000033
338132
Bacteroidota
GCA
Cys
>WENV180409130
OBUU01000034
235203
Bacteroidota
TTT
Lys
>WENV180409136
OBUU01000043
23696
Bacteroidota
GCT
Ser
>WENV180409137
OBUU01000043
338155
Bacteroidota
CTC
Glu
>WENV180409139
OBUU01000046
58714
Bacteroidota
CAA
Leu
>WENV180409140
OBUU01000047
338132
Bacteroidota
GCA
Cys
>WENV180409149
OBUU01000058
80614
Bacteroidota
>WENV180409152
OBUU01000062
144656
Bacteroidota
GTG
His
>WENV180409153
OBUU01000062
16224
Bacteroidota
GGA
Ser
>WENV180409158
OBUU01000065
415410
Bacteroidota
TTG
Gln
>WENV180409161
OBUU01000069
95559
Bacteroidota
TAG
Leu
>WENV180409174
OBUU01000074
132360
Bacteroidota
GGG
Pro
>WENV180409175
OBUU01000074
419272
Bacteroidota
CTG
Gln
>WENV180409177
OBUU01000086
52358
Bacteroidota
TGA
Ser
>WENV180409178
OBUU01000093
338125
Bacteroidota
CCT
Arg
>WENV180409195
OBUU01000110
425638
Bacteroidota
CTG
Gln
>WENV180409200
OBUU01000124
235203
Bacteroidota
TTT
Lys
>WENV180409203
OBUU01000132
338165
Bacteroidota
GGT
Thr
>WENV180409221
OBUU01000170
16220
Bacteroidota
GGA
Ser
>WENV180409223
OBUU01000177
144659
Bacteroidota
GTG
His
>WENV180409224
OBUU01000177
144659
Bacteroidota
GTG
His
>WENV180409266
OBUU01000239
235207
Bacteroidota
CAT
Met
>WENV180409270
OBUU01000258
113604
Bacteroidota
>WENV180409273
OBUU01000258
113604
Bacteroidota
>WENV180409275
OBUU01000267
193809
Bacteroidota
CAT
Met
>WENV180409279
OBUU01000301
80607
Bacteroidota
GTA
Tyr
>WENV180409281
OBUU01000314
44852
Bacteroidota
TAA
Leu
>WENV180409315
OBUU01000463
52358
Bacteroidota
TGA
Ser
>WENV180409326
OBUU01000515
425638
Bacteroidota
CTG
Gln
>WENV180409347
OBUU01000648
80607
Bacteroidota
GTA
Tyr
>WENV180409348
OBUU01000648
144590
Bacteroidota
GTT
Asn
>WENV180409349
OBUU01000648
144590
Bacteroidota
GTT
Asn
>WENV180409391
OBUU01000935
415410
Bacteroidota
TTG
Gln
>WENV180409443
OBUU01001393
52358
Bacteroidota
TGA
Ser
>WENV180409512
OBUU01002432
235102
Bacteroidota
CGT
Thr
>WENV180409517
OBUU01002490
144655
Bacteroidota
GGC
Ala
>WENV180409563
OBUU01006968
144655
Bacteroidota
GGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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