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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
61 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180481077
OBZE01000318
235097
Bacteroidota
TTT
Lys
>WENV180481120
OBZE01000750
235097
Bacteroidota
TTT
Lys
>WENV180481152
OBZE01001331
235102
Bacteroidota
CGT
Thr
>WENV180481261
OBZE01010494
144657
Bacteroidota
CGG
Pro
>WENV180480868
OBZE01000030
338155
Bacteroidota
CTC
Glu
>WENV180480949
OBZE01000101
338155
Bacteroidota
CTC
Glu
>WENV180481268
OBZE01014240
58715
Bacteroidota
GAG
Leu
>WENV180480831
OBZE01000016
95618
Bacteroidota
TAG
Leu
>WENV180481235
OBZE01004447
338486
Bacteroidota
CAT
Met
>WENV180480804
OBZE01000002
411543
Bacteroidota
CTG
Gln
>WENV180481243
OBZE01005876
59689
Bacteroidota
CAG
Leu
>WENV180481047
OBZE01000238
436206
Bacteroidota
TTG
Gln
>WENV180480975
OBZE01000129
436206
Bacteroidota
TTG
Gln
>WENV180481160
OBZE01001703
20893
Bacteroidota
GGA
Ser
>WENV180480806
OBZE01000003
272983
Bacteroidota
CGT
Thr
>WENV180480985
OBZE01000138
338124
Bacteroidota
CCG
Arg
>WENV180481163
OBZE01001860
238121
Bacteroidota
CTT
Lys
>WENV180481098
OBZE01000520
338132
Bacteroidota
GCA
Cys
>WENV180481058
OBZE01000265
338132
Bacteroidota
GCA
Cys
>WENV180480984
OBZE01000137
338132
Bacteroidota
GCA
Cys
>WENV180480827
OBZE01000012
144688
Bacteroidota
CAT
Met
>WENV180480885
OBZE01000043
181746
Bacteroidota
GGC
Ala
>WENV180480927
OBZE01000076
301449
Bacteroidota
CGG
Pro
>WENV180480863
OBZE01000026
301449
Bacteroidota
CGG
Pro
>WENV180480910
OBZE01000068
144933
Bacteroidota
TCT
Arg
>WENV180480819
OBZE01000005
144933
Bacteroidota
TCT
Arg
>WENV180480805
OBZE01000002
141414
Bacteroidota
GGG
Pro
>WENV180481002
OBZE01000156
144656
Bacteroidota
GTG
His
>WENV180481003
OBZE01000163
235207
Bacteroidota
CAT
Met
>WENV180480883
OBZE01000038
235207
Bacteroidota
CAT
Met
>WENV180481233
OBZE01004069
144659
Bacteroidota
GTG
His
>WENV180481237
OBZE01005251
235180
Bacteroidota
CCA
Trp
>WENV180480921
OBZE01000074
144596
Bacteroidota
GGC
Ala
>WENV180481118
OBZE01000688
80607
Bacteroidota
GTA
Tyr
>WENV180481053
OBZE01000246
80607
Bacteroidota
GTA
Tyr
>WENV180480865
OBZE01000028
80607
Bacteroidota
GTA
Tyr
>WENV180480800
OBZE01000001
80607
Bacteroidota
GTA
Tyr
>WENV180481051
OBZE01000246
144590
Bacteroidota
GTT
Asn
>WENV180481050
OBZE01000246
144590
Bacteroidota
GTT
Asn
>WENV180481076
OBZE01000315
95559
Bacteroidota
TAG
Leu
>WENV180481251
OBZE01007623
144655
Bacteroidota
GGC
Ala
>WENV180481218
OBZE01003274
338164
Bacteroidota
TTC
Glu
>WENV180481126
OBZE01000897
95875
Bacteroidota
TAG
Leu
>WENV180480824
OBZE01000012
338314
Bacteroidota
CCT
Arg
>WENV180481199
OBZE01002195
240012
Bacteroidota
CCC
Gly
>WENV180481070
OBZE01000297
44852
Bacteroidota
TAA
Leu
>WENV180481216
OBZE01003109
147439
Bacteroidota
TCT
Arg
>WENV180480858
OBZE01000025
338165
Bacteroidota
GGT
Thr
>WENV180481031
OBZE01000205
425638
Bacteroidota
CTG
Gln
>WENV180480848
OBZE01000021
19317
Bacteroidota
GGA
Ser
>WENV180480948
OBZE01000101
23696
Bacteroidota
GCT
Ser
>WENV180481078
OBZE01000321
56823
Bacteroidota
TGA
Ser
>WENV180481021
OBZE01000183
56823
Bacteroidota
TGA
Ser
>WENV180480803
OBZE01000001
56823
Bacteroidota
TGA
Ser
>WENV180480802
OBZE01000001
56823
Bacteroidota
TGA
Ser
>WENV180481081
OBZE01000330
16224
Bacteroidota
GGA
Ser
>WENV180481061
OBZE01000279
16220
Bacteroidota
GGA
Ser
>WENV180481023
OBZE01000199
338125
Bacteroidota
CCT
Arg
>WENV180480886
OBZE01000049
338125
Bacteroidota
CCT
Arg
>WENV180481242
OBZE01005876
235129
Bacteroidota
GCC
Gly
>WENV180480822
OBZE01000008
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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