This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
108 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180525274
OCHI01000121
291612
Bacteroidota
>WENV180525531
OCHI01000492
291612
Bacteroidota
>WENV180525342
OCHI01000175
73011
Bacteroidota
CAA
Leu
>WENV180525044
OCHI01000007
74084
Bacteroidota
CAG
Leu
>WENV180525251
OCHI01000107
74084
Bacteroidota
CAG
Leu
>WENV180525755
OCHI01001311
289031
Bacteroidota
CAT
Met
>WENV180525854
OCHI01002219
289031
Bacteroidota
CAT
Met
>WENV180525314
OCHI01000149
280557
Bacteroidota
CAT
Met
>WENV180525561
OCHI01000558
201819
Bacteroidota
CAT
Met
>WENV180526753
OCHI01062820
175936
Bacteroidota
CAT
Met
>WENV180525243
OCHI01000103
399200
Bacteroidota
CAT
Met
>WENV180525374
OCHI01000219
399200
Bacteroidota
CAT
Met
>WENV180525744
OCHI01001242
399200
Bacteroidota
CAT
Met
>WENV180525745
OCHI01001242
399200
Bacteroidota
CAT
Met
>WENV180525780
OCHI01001469
186874
Bacteroidota
CAT
Met
>WENV180525071
OCHI01000016
188555
Bacteroidota
CAT
Met
>WENV180526093
OCHI01005232
188555
Bacteroidota
CAT
Met
>WENV180525746
OCHI01001246
295385
Bacteroidota
CCA
Trp
>WENV180525253
OCHI01000107
280530
Bacteroidota
CCA
Trp
>WENV180525093
OCHI01000033
285750
Bacteroidota
CCC
Gly
>WENV180525177
OCHI01000060
398828
Bacteroidota
CCG
Arg
>WENV180525081
OCHI01000021
398829
Bacteroidota
CCT
Arg
>WENV180525179
OCHI01000061
404226
Bacteroidota
CCT
Arg
>WENV180525668
OCHI01000980
175904
Bacteroidota
CGG
Pro
>WENV180526015
OCHI01003961
175904
Bacteroidota
CGG
Pro
>WENV180526805
OCHI01075656
280451
Bacteroidota
CGT
Thr
>WENV180525979
OCHI01003394
331443
Bacteroidota
CGT
Thr
>WENV180525883
OCHI01002414
398860
Bacteroidota
CTC
Glu
>WENV180526072
OCHI01004645
483416
Bacteroidota
CTG
Gln
>WENV180526357
OCHI01014484
483416
Bacteroidota
CTG
Gln
>WENV180526473
OCHI01023826
483416
Bacteroidota
CTG
Gln
>WENV180525186
OCHI01000064
488746
Bacteroidota
CTG
Gln
>WENV180525079
OCHI01000020
480325
Bacteroidota
CTG
Gln
>WENV180526160
OCHI01006852
186142
Bacteroidota
GAT
Ile
>WENV180525268
OCHI01000118
398836
Bacteroidota
GCA
Cys
>WENV180525503
OCHI01000422
398836
Bacteroidota
GCA
Cys
>WENV180525642
OCHI01000804
398836
Bacteroidota
GCA
Cys
>WENV180525844
OCHI01002114
398836
Bacteroidota
GCA
Cys
>WENV180525923
OCHI01002699
398836
Bacteroidota
GCA
Cys
>WENV180525043
OCHI01000007
280478
Bacteroidota
GCC
Gly
>WENV180525551
OCHI01000539
280478
Bacteroidota
GCC
Gly
>WENV180525553
OCHI01000539
280478
Bacteroidota
GCC
Gly
>WENV180525932
OCHI01002859
280478
Bacteroidota
GCC
Gly
>WENV180525934
OCHI01002859
280478
Bacteroidota
GCC
Gly
>WENV180525187
OCHI01000064
20206
Bacteroidota
GGA
Ser
>WENV180525808
OCHI01001638
20449
Bacteroidota
GGA
Ser
>WENV180525823
OCHI01001781
20449
Bacteroidota
GGA
Ser
>WENV180526041
OCHI01004388
20766
Bacteroidota
GGA
Ser
>WENV180525170
OCHI01000056
175902
Bacteroidota
GGC
Ala
>WENV180525456
OCHI01000328
175844
Bacteroidota
GGC
Ala
>WENV180526028
OCHI01004204
183889
Bacteroidota
GGC
Ala
>WENV180525188
OCHI01000064
158068
Bacteroidota
GGG
Pro
>WENV180525904
OCHI01002562
158068
Bacteroidota
GGG
Pro
>WENV180526446
OCHI01020422
158068
Bacteroidota
GGG
Pro
>WENV180525346
OCHI01000187
398872
Bacteroidota
GGT
Thr
>WENV180525661
OCHI01000929
398872
Bacteroidota
GGT
Thr
>WENV180526720
OCHI01056423
405877
Bacteroidota
GGT
Thr
>WENV180526825
OCHI01081303
400088
Bacteroidota
GGT
Thr
>WENV180525473
OCHI01000368
99847
Bacteroidota
GTA
Tyr
>WENV180525535
OCHI01000497
99847
Bacteroidota
GTA
Tyr
>WENV180525847
OCHI01002166
99847
Bacteroidota
GTA
Tyr
>WENV180526491
OCHI01025095
99847
Bacteroidota
GTA
Tyr
>WENV180525077
OCHI01000020
203954
Bacteroidota
GTC
Asp
>WENV180525078
OCHI01000020
203954
Bacteroidota
GTC
Asp
>WENV180525422
OCHI01000284
175906
Bacteroidota
GTG
His
>WENV180525423
OCHI01000284
175906
Bacteroidota
GTG
His
>WENV180525547
OCHI01000528
175903
Bacteroidota
GTG
His
>WENV180525467
OCHI01000348
175838
Bacteroidota
GTT
Asn
>WENV180525468
OCHI01000348
175838
Bacteroidota
GTT
Asn
>WENV180526569
OCHI01031466
182267
Bacteroidota
GTT
Asn
>WENV180525334
OCHI01000168
186108
Bacteroidota
GTT
Asn
>WENV180525335
OCHI01000168
186108
Bacteroidota
GTT
Asn
>WENV180526480
OCHI01024409
186108
Bacteroidota
GTT
Asn
>WENV180525134
OCHI01000048
187400
Bacteroidota
GTT
Asn
>WENV180525135
OCHI01000048
187400
Bacteroidota
GTT
Asn
>WENV180525083
OCHI01000021
56072
Bacteroidota
TAA
Leu
>WENV180525519
OCHI01000457
159415
Bacteroidota
TAC
Val
>WENV180525520
OCHI01000457
159415
Bacteroidota
TAC
Val
>WENV180525358
OCHI01000206
117741
Bacteroidota
TAG
Leu
>WENV180525525
OCHI01000474
118089
Bacteroidota
TAG
Leu
>WENV180525897
OCHI01002542
118089
Bacteroidota
TAG
Leu
>WENV180526682
OCHI01047872
117804
Bacteroidota
TAG
Leu
>WENV180525094
OCHI01000033
178907
Bacteroidota
TCT
Arg
>WENV180525673
OCHI01000997
176192
Bacteroidota
TCT
Arg
>WENV180526039
OCHI01004349
176192
Bacteroidota
TCT
Arg
>WENV180525515
OCHI01000453
56493
Bacteroidota
TGA
Ser
>WENV180525362
OCHI01000212
57807
Bacteroidota
TGA
Ser
>WENV180525778
OCHI01001467
57807
Bacteroidota
TGA
Ser
>WENV180525875
OCHI01002338
57807
Bacteroidota
TGA
Ser
>WENV180526040
OCHI01004388
57807
Bacteroidota
TGA
Ser
>WENV180526161
OCHI01006852
186143
Bacteroidota
TGC
Ala
>WENV180525180
OCHI01000061
398871
Bacteroidota
TTC
Glu
>WENV180525181
OCHI01000061
398871
Bacteroidota
TTC
Glu
>WENV180526743
OCHI01060956
418894
Bacteroidota
TTC
Glu
>WENV180526200
OCHI01007950
480404
Bacteroidota
TTG
Gln
>WENV180525084
OCHI01000022
484496
Bacteroidota
TTG
Gln
>WENV180525357
OCHI01000204
484496
Bacteroidota
TTG
Gln
>WENV180525787
OCHI01001514
484496
Bacteroidota
TTG
Gln
>WENV180525621
OCHI01000702
285360
Bacteroidota
TTT
Lys
>WENV180525931
OCHI01002819
285360
Bacteroidota
TTT
Lys
>WENV180526239
OCHI01009055
285360
Bacteroidota
TTT
Lys
>WENV180525832
OCHI01001971
280553
Bacteroidota
TTT
Lys
>WENV180525214
OCHI01000081
332896
Bacteroidota
TTT
Lys
>WENV180526122
OCHI01005621
332896
Bacteroidota
TTT
Lys
>WENV180526409
OCHI01017787
332896
Bacteroidota
TTT
Lys
>WENV180525284
OCHI01000128
280446
Bacteroidota
TTT
Lys
>WENV180526296
OCHI01011913
280446
Bacteroidota
TTT
Lys
>WENV180526440
OCHI01020030
280446
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK