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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
125 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181071571
OEAN01000002
20766
Bacteroidota
GGA
Ser
>WENV181071573
OEAN01000004
322836
Bacteroidota
CGT
Thr
>WENV181071575
OEAN01000005
158068
Bacteroidota
GGG
Pro
>WENV181071576
OEAN01000005
480318
Bacteroidota
CTG
Gln
>WENV181071577
OEAN01000006
480404
Bacteroidota
TTG
Gln
>WENV181071596
OEAN01000010
99847
Bacteroidota
GTA
Tyr
>WENV181071611
OEAN01000019
280478
Bacteroidota
GCC
Gly
>WENV181071612
OEAN01000019
74084
Bacteroidota
CAG
Leu
>WENV181071621
OEAN01000022
280446
Bacteroidota
TTT
Lys
>WENV181071625
OEAN01000023
289031
Bacteroidota
CAT
Met
>WENV181071633
OEAN01000027
480325
Bacteroidota
CTG
Gln
>WENV181071634
OEAN01000027
480325
Bacteroidota
CTG
Gln
>WENV181071635
OEAN01000027
398836
Bacteroidota
GCA
Cys
>WENV181071638
OEAN01000028
398860
Bacteroidota
CTC
Glu
>WENV181071639
OEAN01000029
291612
Bacteroidota
>WENV181071648
OEAN01000034
118089
Bacteroidota
TAG
Leu
>WENV181071650
OEAN01000035
176192
Bacteroidota
TCT
Arg
>WENV181071665
OEAN01000043
332896
Bacteroidota
TTT
Lys
>WENV181071675
OEAN01000048
483416
Bacteroidota
CTG
Gln
>WENV181071681
OEAN01000050
400088
Bacteroidota
GGT
Thr
>WENV181071682
OEAN01000050
280530
Bacteroidota
CCA
Trp
>WENV181071701
OEAN01000064
74084
Bacteroidota
CAG
Leu
>WENV181071704
OEAN01000064
175904
Bacteroidota
CGG
Pro
>WENV181071705
OEAN01000064
280530
Bacteroidota
CCA
Trp
>WENV181071710
OEAN01000067
280532
Bacteroidota
>WENV181071715
OEAN01000070
178907
Bacteroidota
TCT
Arg
>WENV181071721
OEAN01000075
21127
Bacteroidota
GGA
Ser
>WENV181071733
OEAN01000081
399200
Bacteroidota
CAT
Met
>WENV181071739
OEAN01000089
488746
Bacteroidota
CTG
Gln
>WENV181071740
OEAN01000089
20206
Bacteroidota
GGA
Ser
>WENV181071741
OEAN01000089
158068
Bacteroidota
GGG
Pro
>WENV181071742
OEAN01000090
280553
Bacteroidota
TTT
Lys
>WENV181071743
OEAN01000091
399200
Bacteroidota
CAT
Met
>WENV181071748
OEAN01000095
117804
Bacteroidota
TAG
Leu
>WENV181071750
OEAN01000099
99847
Bacteroidota
GTA
Tyr
>WENV181071751
OEAN01000100
57807
Bacteroidota
TGA
Ser
>WENV181071752
OEAN01000100
56493
Bacteroidota
TGA
Ser
>WENV181071754
OEAN01000102
175906
Bacteroidota
GTG
His
>WENV181071755
OEAN01000102
175906
Bacteroidota
GTG
His
>WENV181071759
OEAN01000105
203954
Bacteroidota
GTC
Asp
>WENV181071760
OEAN01000105
203954
Bacteroidota
GTC
Asp
>WENV181071823
OEAN01000156
280478
Bacteroidota
GCC
Gly
>WENV181071825
OEAN01000156
280478
Bacteroidota
GCC
Gly
>WENV181071829
OEAN01000157
57807
Bacteroidota
TGA
Ser
>WENV181071840
OEAN01000169
57807
Bacteroidota
TGA
Ser
>WENV181071844
OEAN01000178
56493
Bacteroidota
TGA
Ser
>WENV181071845
OEAN01000178
175903
Bacteroidota
GTG
His
>WENV181071846
OEAN01000179
280553
Bacteroidota
TTT
Lys
>WENV181071847
OEAN01000181
73011
Bacteroidota
CAA
Leu
>WENV181071852
OEAN01000184
483416
Bacteroidota
CTG
Gln
>WENV181071853
OEAN01000186
332896
Bacteroidota
TTT
Lys
>WENV181071857
OEAN01000193
201819
Bacteroidota
CAT
Met
>WENV181071869
OEAN01000207
117741
Bacteroidota
TAG
Leu
>WENV181071871
OEAN01000212
484496
Bacteroidota
TTG
Gln
>WENV181071888
OEAN01000238
186108
Bacteroidota
GTT
Asn
>WENV181071889
OEAN01000238
186108
Bacteroidota
GTT
Asn
>WENV181071897
OEAN01000244
158068
Bacteroidota
GGG
Pro
>WENV181071910
OEAN01000250
285360
Bacteroidota
TTT
Lys
>WENV181071920
OEAN01000264
56072
Bacteroidota
TAA
Leu
>WENV181071921
OEAN01000267
480404
Bacteroidota
TTG
Gln
>WENV181071926
OEAN01000276
99847
Bacteroidota
GTA
Tyr
>WENV181071928
OEAN01000284
20449
Bacteroidota
GGA
Ser
>WENV181071930
OEAN01000288
175902
Bacteroidota
GGC
Ala
>WENV181071941
OEAN01000299
483416
Bacteroidota
CTG
Gln
>WENV181071948
OEAN01000303
280557
Bacteroidota
CAT
Met
>WENV181071962
OEAN01000320
186874
Bacteroidota
CAT
Met
>WENV181071964
OEAN01000323
289031
Bacteroidota
CAT
Met
>WENV181071969
OEAN01000331
398860
Bacteroidota
CTC
Glu
>WENV181071975
OEAN01000352
398836
Bacteroidota
GCA
Cys
>WENV181071976
OEAN01000354
398871
Bacteroidota
TTC
Glu
>WENV181071977
OEAN01000354
398871
Bacteroidota
TTC
Glu
>WENV181071979
OEAN01000356
285750
Bacteroidota
CCC
Gly
>WENV181071980
OEAN01000367
57807
Bacteroidota
TGA
Ser
>WENV181071981
OEAN01000368
158068
Bacteroidota
GGG
Pro
>WENV181071983
OEAN01000370
188555
Bacteroidota
CAT
Met
>WENV181072001
OEAN01000397
280557
Bacteroidota
CAT
Met
>WENV181072007
OEAN01000404
295385
Bacteroidota
CCA
Trp
>WENV181072009
OEAN01000408
405877
Bacteroidota
GGT
Thr
>WENV181072010
OEAN01000414
398836
Bacteroidota
GCA
Cys
>WENV181072021
OEAN01000425
332896
Bacteroidota
TTT
Lys
>WENV181072032
OEAN01000445
289031
Bacteroidota
CAT
Met
>WENV181072045
OEAN01000463
175936
Bacteroidota
CAT
Met
>WENV181072058
OEAN01000502
158068
Bacteroidota
GGG
Pro
>WENV181072064
OEAN01000514
21127
Bacteroidota
GGA
Ser
>WENV181072078
OEAN01000562
398836
Bacteroidota
GCA
Cys
>WENV181072102
OEAN01000606
99847
Bacteroidota
GTA
Tyr
>WENV181072116
OEAN01000646
399026
Bacteroidota
CCT
Arg
>WENV181072145
OEAN01000699
186874
Bacteroidota
CAT
Met
>WENV181072147
OEAN01000720
57807
Bacteroidota
TGA
Ser
>WENV181072155
OEAN01000736
29791
Bacteroidota
GCT
Ser
>WENV181072156
OEAN01000736
398860
Bacteroidota
CTC
Glu
>WENV181072161
OEAN01000748
398836
Bacteroidota
GCA
Cys
>WENV181072177
OEAN01000816
295349
Bacteroidota
CCA
Trp
>WENV181072181
OEAN01000827
332896
Bacteroidota
TTT
Lys
>WENV181072186
OEAN01000841
156467
Bacteroidota
TGG
Pro
>WENV181072240
OEAN01001089
398828
Bacteroidota
CCG
Arg
>WENV181072250
OEAN01001170
484496
Bacteroidota
TTG
Gln
>WENV181072254
OEAN01001222
140771
Bacteroidota
>WENV181072282
OEAN01001374
56493
Bacteroidota
TGA
Ser
>WENV181072283
OEAN01001374
20766
Bacteroidota
GGA
Ser
>WENV181072286
OEAN01001403
20449
Bacteroidota
GGA
Ser
>WENV181072296
OEAN01001453
398836
Bacteroidota
GCA
Cys
>WENV181072298
OEAN01001488
280446
Bacteroidota
TTT
Lys
>WENV181072354
OEAN01001933
280446
Bacteroidota
TTT
Lys
>WENV181072355
OEAN01001948
175844
Bacteroidota
GGC
Ala
>WENV181072377
OEAN01002267
175838
Bacteroidota
GTT
Asn
>WENV181072428
OEAN01003156
285360
Bacteroidota
TTT
Lys
>WENV181072434
OEAN01003177
405877
Bacteroidota
GGT
Thr
>WENV181072449
OEAN01003306
285360
Bacteroidota
TTT
Lys
>WENV181072546
OEAN01005873
159415
Bacteroidota
TAC
Val
>WENV181072547
OEAN01005873
159415
Bacteroidota
TAC
Val
>WENV181072552
OEAN01006136
176192
Bacteroidota
TCT
Arg
>WENV181072598
OEAN01008236
291612
Bacteroidota
>WENV181072644
OEAN01011630
285360
Bacteroidota
TTT
Lys
>WENV181072832
OEAN01034204
99847
Bacteroidota
GTA
Tyr
>WENV181072852
OEAN01037705
57807
Bacteroidota
TGA
Ser
>WENV181072854
OEAN01038659
99847
Bacteroidota
GTA
Tyr
>WENV181072862
OEAN01039831
215303
Bacteroidota
GTC
Asp
>WENV181072897
OEAN01056632
186142
Bacteroidota
GAT
Ile
>WENV181072898
OEAN01056632
186143
Bacteroidota
TGC
Ala
>WENV181072944
OEAN01073981
99847
Bacteroidota
GTA
Tyr
>WENV181072967
OEAN01081208
280451
Bacteroidota
CGT
Thr
>WENV181073009
OEAN01103965
480404
Bacteroidota
TTG
Gln
>WENV181073090
OEAN01156039
398872
Bacteroidota
GGT
Thr
>WENV181073125
OEAN01170023
159415
Bacteroidota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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