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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
68 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181482813
OGFK01000007
285360
Bacteroidota
TTT
Lys
>WENV181482823
OGFK01000016
57807
Bacteroidota
TGA
Ser
>WENV181482831
OGFK01000020
175902
Bacteroidota
GGC
Ala
>WENV181482837
OGFK01000024
20206
Bacteroidota
GGA
Ser
>WENV181482836
OGFK01000024
488746
Bacteroidota
CTG
Gln
>WENV181482835
OGFK01000024
170323
Bacteroidota
GGG
Pro
>WENV181482843
OGFK01000026
351598
Bacteroidota
CGG
Pro
>WENV181482847
OGFK01000030
201819
Bacteroidota
CAT
Met
>WENV181482851
OGFK01000032
56493
Bacteroidota
TGA
Ser
>WENV181482855
OGFK01000036
365112
Bacteroidota
TTT
Lys
>WENV181482864
OGFK01000047
201819
Bacteroidota
CAT
Met
>WENV181482874
OGFK01000057
191205
Bacteroidota
TGG
Pro
>WENV181482882
OGFK01000069
99847
Bacteroidota
GTA
Tyr
>WENV181482884
OGFK01000074
57807
Bacteroidota
TGA
Ser
>WENV181482887
OGFK01000076
175844
Bacteroidota
GGC
Ala
>WENV181482894
OGFK01000082
56493
Bacteroidota
TGA
Ser
>WENV181482905
OGFK01000090
285360
Bacteroidota
TTT
Lys
>WENV181482908
OGFK01000094
170323
Bacteroidota
GGG
Pro
>WENV181482915
OGFK01000107
398829
Bacteroidota
CCT
Arg
>WENV181482934
OGFK01000127
351598
Bacteroidota
CGG
Pro
>WENV181482935
OGFK01000132
365112
Bacteroidota
TTT
Lys
>WENV181482941
OGFK01000139
280557
Bacteroidota
CAT
Met
>WENV181482946
OGFK01000142
118432
Bacteroidota
CAG
Leu
>WENV181482959
OGFK01000172
400161
Bacteroidota
GGT
Thr
>WENV181482963
OGFK01000179
175903
Bacteroidota
GTG
His
>WENV181482964
OGFK01000181
398836
Bacteroidota
GCA
Cys
>WENV181482976
OGFK01000206
365112
Bacteroidota
TTT
Lys
>WENV181482985
OGFK01000224
280446
Bacteroidota
TTT
Lys
>WENV181482989
OGFK01000226
280557
Bacteroidota
CAT
Met
>WENV181483002
OGFK01000261
170323
Bacteroidota
GGG
Pro
>WENV181483007
OGFK01000271
484496
Bacteroidota
TTG
Gln
>WENV181483009
OGFK01000273
351598
Bacteroidota
CGG
Pro
>WENV181483019
OGFK01000305
56072
Bacteroidota
TAA
Leu
>WENV181483028
OGFK01000333
191205
Bacteroidota
TGG
Pro
>WENV181483031
OGFK01000345
176192
Bacteroidota
TCT
Arg
>WENV181483032
OGFK01000349
398828
Bacteroidota
CCG
Arg
>WENV181483042
OGFK01000369
488746
Bacteroidota
CTG
Gln
>WENV181483048
OGFK01000405
480404
Bacteroidota
TTG
Gln
>WENV181483050
OGFK01000409
46648
Bacteroidota
TAA
Leu
>WENV181483054
OGFK01000447
99847
Bacteroidota
GTA
Tyr
>WENV181483060
OGFK01000463
404109
Bacteroidota
CTC
Glu
>WENV181483061
OGFK01000463
404109
Bacteroidota
CTC
Glu
>WENV181483062
OGFK01000475
398836
Bacteroidota
GCA
Cys
>WENV181483065
OGFK01000482
57807
Bacteroidota
TGA
Ser
>WENV181483067
OGFK01000497
175844
Bacteroidota
GGC
Ala
>WENV181483071
OGFK01000515
398828
Bacteroidota
CCG
Arg
>WENV181483077
OGFK01000546
159415
Bacteroidota
TAC
Val
>WENV181483078
OGFK01000546
159415
Bacteroidota
TAC
Val
>WENV181483085
OGFK01000552
398836
Bacteroidota
GCA
Cys
>WENV181483124
OGFK01000740
398836
Bacteroidota
GCA
Cys
>WENV181483130
OGFK01000782
484496
Bacteroidota
TTG
Gln
>WENV181483131
OGFK01000801
20492
Bacteroidota
GGA
Ser
>WENV181483136
OGFK01000827
351598
Bacteroidota
CGG
Pro
>WENV181483140
OGFK01000833
398860
Bacteroidota
CTC
Glu
>WENV181483154
OGFK01000881
491385
Bacteroidota
TTG
Gln
>WENV181483164
OGFK01000960
484496
Bacteroidota
TTG
Gln
>WENV181483171
OGFK01000981
351598
Bacteroidota
CGG
Pro
>WENV181483242
OGFK01001603
117741
Bacteroidota
TAG
Leu
>WENV181483245
OGFK01001653
398836
Bacteroidota
GCA
Cys
>WENV181483264
OGFK01001792
351598
Bacteroidota
CGG
Pro
>WENV181483272
OGFK01001815
365112
Bacteroidota
TTT
Lys
>WENV181483274
OGFK01001836
170323
Bacteroidota
GGG
Pro
>WENV181483311
OGFK01002351
398836
Bacteroidota
GCA
Cys
>WENV181483324
OGFK01002448
175844
Bacteroidota
GGC
Ala
>WENV181483325
OGFK01002470
484496
Bacteroidota
TTG
Gln
>WENV181483393
OGFK01003505
280451
Bacteroidota
CGT
Thr
>WENV181483438
OGFK01004495
20492
Bacteroidota
GGA
Ser
>WENV181483610
OGFK01010578
351598
Bacteroidota
CGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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