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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
75 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181539367
OGIA01000002
280446
Bacteroidota
TTT
Lys
>WENV181539375
OGIA01000004
280478
Bacteroidota
GCC
Gly
>WENV181539376
OGIA01000004
74084
Bacteroidota
CAG
Leu
>WENV181539379
OGIA01000006
289031
Bacteroidota
CAT
Met
>WENV181539394
OGIA01000010
56493
Bacteroidota
TGA
Ser
>WENV181539395
OGIA01000010
398836
Bacteroidota
GCA
Cys
>WENV181539396
OGIA01000010
398836
Bacteroidota
GCA
Cys
>WENV181539403
OGIA01000014
285750
Bacteroidota
CCC
Gly
>WENV181539404
OGIA01000014
178907
Bacteroidota
TCT
Arg
>WENV181539409
OGIA01000017
156068
Bacteroidota
TAC
Val
>WENV181539411
OGIA01000019
405877
Bacteroidota
GGT
Thr
>WENV181539423
OGIA01000024
203954
Bacteroidota
GTC
Asp
>WENV181539424
OGIA01000024
203954
Bacteroidota
GTC
Asp
>WENV181539425
OGIA01000024
203954
Bacteroidota
GTC
Asp
>WENV181539426
OGIA01000027
57807
Bacteroidota
TGA
Ser
>WENV181539433
OGIA01000031
117741
Bacteroidota
TAG
Leu
>WENV181539434
OGIA01000032
201819
Bacteroidota
CAT
Met
>WENV181539455
OGIA01000041
398828
Bacteroidota
CCG
Arg
>WENV181539462
OGIA01000047
280446
Bacteroidota
TTT
Lys
>WENV181539464
OGIA01000048
280446
Bacteroidota
TTT
Lys
>WENV181539470
OGIA01000053
99847
Bacteroidota
GTA
Tyr
>WENV181539474
OGIA01000057
480325
Bacteroidota
CTG
Gln
>WENV181539475
OGIA01000057
480325
Bacteroidota
CTG
Gln
>WENV181539476
OGIA01000058
484496
Bacteroidota
TTG
Gln
>WENV181539481
OGIA01000062
398829
Bacteroidota
CCT
Arg
>WENV181539523
OGIA01000100
182267
Bacteroidota
GTT
Asn
>WENV181539524
OGIA01000100
182267
Bacteroidota
GTT
Asn
>WENV181539525
OGIA01000100
182267
Bacteroidota
GTT
Asn
>WENV181539527
OGIA01000104
158068
Bacteroidota
GGG
Pro
>WENV181539528
OGIA01000104
488746
Bacteroidota
CTG
Gln
>WENV181539529
OGIA01000104
20206
Bacteroidota
GGA
Ser
>WENV181539549
OGIA01000126
398836
Bacteroidota
GCA
Cys
>WENV181539556
OGIA01000130
399200
Bacteroidota
CAT
Met
>WENV181539564
OGIA01000140
158068
Bacteroidota
GGG
Pro
>WENV181539565
OGIA01000140
280446
Bacteroidota
TTT
Lys
>WENV181539576
OGIA01000152
398871
Bacteroidota
TTC
Glu
>WENV181539577
OGIA01000152
398871
Bacteroidota
TTC
Glu
>WENV181539578
OGIA01000152
404226
Bacteroidota
CCT
Arg
>WENV181539588
OGIA01000171
175906
Bacteroidota
GTG
His
>WENV181539597
OGIA01000183
484496
Bacteroidota
TTG
Gln
>WENV181539601
OGIA01000190
175903
Bacteroidota
GTG
His
>WENV181539603
OGIA01000191
175902
Bacteroidota
GGC
Ala
>WENV181539650
OGIA01000229
73011
Bacteroidota
CAA
Leu
>WENV181539651
OGIA01000232
280451
Bacteroidota
CGT
Thr
>WENV181539664
OGIA01000244
187400
Bacteroidota
GTT
Asn
>WENV181539666
OGIA01000245
404226
Bacteroidota
CCT
Arg
>WENV181539671
OGIA01000254
21127
Bacteroidota
GGA
Ser
>WENV181539677
OGIA01000266
74084
Bacteroidota
CAG
Leu
>WENV181539678
OGIA01000266
20449
Bacteroidota
GGA
Ser
>WENV181539681
OGIA01000271
57807
Bacteroidota
TGA
Ser
>WENV181539707
OGIA01000304
117741
Bacteroidota
TAG
Leu
>WENV181539709
OGIA01000309
483416
Bacteroidota
CTG
Gln
>WENV181539727
OGIA01000345
398836
Bacteroidota
GCA
Cys
>WENV181539738
OGIA01000374
56072
Bacteroidota
TAA
Leu
>WENV181539741
OGIA01000382
280530
Bacteroidota
CCA
Trp
>WENV181539786
OGIA01000451
158068
Bacteroidota
GGG
Pro
>WENV181539815
OGIA01000532
398836
Bacteroidota
GCA
Cys
>WENV181539848
OGIA01000635
56072
Bacteroidota
TAA
Leu
>WENV181539879
OGIA01000779
280557
Bacteroidota
CAT
Met
>WENV181539890
OGIA01000825
117804
Bacteroidota
TAG
Leu
>WENV181539921
OGIA01001011
399200
Bacteroidota
CAT
Met
>WENV181539942
OGIA01001155
484496
Bacteroidota
TTG
Gln
>WENV181539966
OGIA01001371
20766
Bacteroidota
GGA
Ser
>WENV181539976
OGIA01001417
186874
Bacteroidota
CAT
Met
>WENV181539980
OGIA01001442
480318
Bacteroidota
CTG
Gln
>WENV181540010
OGIA01001780
480404
Bacteroidota
TTG
Gln
>WENV181540020
OGIA01001858
118089
Bacteroidota
TAG
Leu
>WENV181540057
OGIA01002583
398860
Bacteroidota
CTC
Glu
>WENV181540063
OGIA01002782
480404
Bacteroidota
TTG
Gln
>WENV181540091
OGIA01003495
280557
Bacteroidota
CAT
Met
>WENV181540140
OGIA01005803
285750
Bacteroidota
CCC
Gly
>WENV181540147
OGIA01006303
178133
Bacteroidota
GAT
Ile
>WENV181540173
OGIA01007700
291612
Bacteroidota
>WENV181540209
OGIA01014082
176192
Bacteroidota
TCT
Arg
>WENV181540226
OGIA01017647
186108
Bacteroidota
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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