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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
78 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181545639
OGIH01000051
235097
Bacteroidota
TTT
Lys
>WENV181545670
OGIH01000123
235102
Bacteroidota
CGT
Thr
>WENV181546032
OGIH01002405
235102
Bacteroidota
CGT
Thr
>WENV181546172
OGIH01012151
144657
Bacteroidota
CGG
Pro
>WENV181546019
OGIH01002140
243025
Bacteroidota
CAT
Met
>WENV181546103
OGIH01004753
243025
Bacteroidota
CAT
Met
>WENV181546262
OGIH01029881
338155
Bacteroidota
CTC
Glu
>WENV181546082
OGIH01003855
343138
Bacteroidota
CCT
Arg
>WENV181546157
OGIH01009964
58715
Bacteroidota
GAG
Leu
>WENV181545887
OGIH01000666
17323
Bacteroidota
GGA
Ser
>WENV181545996
OGIH01001613
338486
Bacteroidota
CAT
Met
>WENV181545704
OGIH01000182
413663
Bacteroidota
CTG
Gln
>WENV181546147
OGIH01008170
415410
Bacteroidota
TTG
Gln
>WENV181546097
OGIH01004499
415410
Bacteroidota
TTG
Gln
>WENV181545926
OGIH01000903
415410
Bacteroidota
TTG
Gln
>WENV181545754
OGIH01000288
415410
Bacteroidota
TTG
Gln
>WENV181545801
OGIH01000407
59689
Bacteroidota
CAG
Leu
>WENV181545584
OGIH01000007
144695
Bacteroidota
CAT
Met
>WENV181545747
OGIH01000269
147147
Bacteroidota
GTG
His
>WENV181545895
OGIH01000704
344692
Bacteroidota
GGT
Thr
>WENV181546037
OGIH01002557
341950
Bacteroidota
>WENV181545909
OGIH01000810
338124
Bacteroidota
CCG
Arg
>WENV181545645
OGIH01000062
338124
Bacteroidota
CCG
Arg
>WENV181546123
OGIH01006073
146800
Bacteroidota
>WENV181546114
OGIH01005347
238121
Bacteroidota
CTT
Lys
>WENV181546113
OGIH01005347
238121
Bacteroidota
CTT
Lys
>WENV181546068
OGIH01003448
126641
Bacteroidota
TAC
Val
>WENV181546067
OGIH01003448
126641
Bacteroidota
TAC
Val
>WENV181546026
OGIH01002222
338132
Bacteroidota
GCA
Cys
>WENV181546002
OGIH01001696
338132
Bacteroidota
GCA
Cys
>WENV181545972
OGIH01001311
338132
Bacteroidota
GCA
Cys
>WENV181545810
OGIH01000415
338132
Bacteroidota
GCA
Cys
>WENV181545786
OGIH01000379
338132
Bacteroidota
GCA
Cys
>WENV181545776
OGIH01000360
338132
Bacteroidota
GCA
Cys
>WENV181546045
OGIH01002725
45423
Bacteroidota
TGA
Ser
>WENV181545659
OGIH01000095
37076
Bacteroidota
TAA
Leu
>WENV181546041
OGIH01002603
58714
Bacteroidota
CAA
Leu
>WENV181545891
OGIH01000680
280660
Bacteroidota
CCA
Trp
>WENV181545817
OGIH01000445
144933
Bacteroidota
TCT
Arg
>WENV181546011
OGIH01001945
144656
Bacteroidota
GTG
His
>WENV181545851
OGIH01000534
235207
Bacteroidota
CAT
Met
>WENV181545778
OGIH01000364
235207
Bacteroidota
CAT
Met
>WENV181545677
OGIH01000138
235207
Bacteroidota
CAT
Met
>WENV181545843
OGIH01000491
144659
Bacteroidota
GTG
His
>WENV181546116
OGIH01005453
235180
Bacteroidota
CCA
Trp
>WENV181545749
OGIH01000276
144596
Bacteroidota
GGC
Ala
>WENV181545819
OGIH01000450
80607
Bacteroidota
GTA
Tyr
>WENV181545717
OGIH01000205
80607
Bacteroidota
GTA
Tyr
>WENV181545906
OGIH01000799
344769
Bacteroidota
CTC
Glu
>WENV181545959
OGIH01001159
80614
Bacteroidota
>WENV181546016
OGIH01002069
154643
Bacteroidota
CAT
Met
>WENV181545668
OGIH01000114
415558
Bacteroidota
TTG
Gln
>WENV181545732
OGIH01000233
95559
Bacteroidota
TAG
Leu
>WENV181545818
OGIH01000448
419272
Bacteroidota
CTG
Gln
>WENV181545726
OGIH01000223
144655
Bacteroidota
GGC
Ala
>WENV181546081
OGIH01003855
338164
Bacteroidota
TTC
Glu
>WENV181546042
OGIH01002655
95875
Bacteroidota
TAG
Leu
>WENV181545715
OGIH01000203
44852
Bacteroidota
TAA
Leu
>WENV181546038
OGIH01002560
147439
Bacteroidota
TCT
Arg
>WENV181546115
OGIH01005387
280513
Bacteroidota
TTT
Lys
>WENV181545684
OGIH01000144
238606
Bacteroidota
CGG
Pro
>WENV181545995
OGIH01001604
411550
Bacteroidota
CTG
Gln
>WENV181546083
OGIH01003897
50727
Bacteroidota
TGA
Ser
>WENV181545992
OGIH01001588
50727
Bacteroidota
TGA
Ser
>WENV181545676
OGIH01000133
132360
Bacteroidota
GGG
Pro
>WENV181545574
OGIH01000003
425638
Bacteroidota
CTG
Gln
>WENV181545779
OGIH01000369
239647
Bacteroidota
TTT
Lys
>WENV181545651
OGIH01000085
19317
Bacteroidota
GGA
Ser
>WENV181545637
OGIH01000048
19317
Bacteroidota
GGA
Ser
>WENV181545752
OGIH01000284
353927
Bacteroidota
TTC
Glu
>WENV181545834
OGIH01000472
185921
Bacteroidota
GTC
Asp
>WENV181546261
OGIH01029881
23696
Bacteroidota
GCT
Ser
>WENV181545922
OGIH01000865
414426
Bacteroidota
CTG
Gln
>WENV181546193
OGIH01013971
151960
Bacteroidota
GGC
Ala
>WENV181546109
OGIH01004820
16220
Bacteroidota
GGA
Ser
>WENV181546085
OGIH01004026
338125
Bacteroidota
CCT
Arg
>WENV181545625
OGIH01000035
338125
Bacteroidota
CCT
Arg
>WENV181546105
OGIH01004758
235129
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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