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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
57 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181584728
OGKE01008289
59689
Bacteroidota
CAG
Leu
>WENV181584382
OGKE01001148
243025
Bacteroidota
CAT
Met
>WENV181584075
OGKE01000181
235207
Bacteroidota
CAT
Met
>WENV181584044
OGKE01000144
154643
Bacteroidota
CAT
Met
>WENV181584792
OGKE01011342
151121
Bacteroidota
CAT
Met
>WENV181584214
OGKE01000459
338124
Bacteroidota
CCG
Arg
>WENV181584049
OGKE01000149
338124
Bacteroidota
CCG
Arg
>WENV181583897
OGKE01000001
343138
Bacteroidota
CCT
Arg
>WENV181583988
OGKE01000071
338125
Bacteroidota
CCT
Arg
>WENV181584479
OGKE01001778
301449
Bacteroidota
CGG
Pro
>WENV181584391
OGKE01001193
301449
Bacteroidota
CGG
Pro
>WENV181583919
OGKE01000011
301449
Bacteroidota
CGG
Pro
>WENV181583973
OGKE01000058
235102
Bacteroidota
CGT
Thr
>WENV181584780
OGKE01010295
235102
Bacteroidota
CGT
Thr
>WENV181584318
OGKE01000806
338155
Bacteroidota
CTC
Glu
>WENV181584649
OGKE01004696
338155
Bacteroidota
CTC
Glu
>WENV181584880
OGKE01021710
411550
Bacteroidota
CTG
Gln
>WENV181584592
OGKE01002890
425638
Bacteroidota
CTG
Gln
>WENV181584415
OGKE01001322
425638
Bacteroidota
CTG
Gln
>WENV181583899
OGKE01000003
425638
Bacteroidota
CTG
Gln
>WENV181584104
OGKE01000220
414426
Bacteroidota
CTG
Gln
>WENV181584947
OGKE01034129
238121
Bacteroidota
CTT
Lys
>WENV181584748
OGKE01008919
313363
Bacteroidota
GAA
Phe
>WENV181584729
OGKE01008289
58715
Bacteroidota
GAG
Leu
>WENV181584746
OGKE01008906
153993
Bacteroidota
GAT
Ile
>WENV181584395
OGKE01001218
338132
Bacteroidota
GCA
Cys
>WENV181584324
OGKE01000835
338132
Bacteroidota
GCA
Cys
>WENV181584651
OGKE01004709
267954
Bacteroidota
GCC
Gly
>WENV181584727
OGKE01008289
235129
Bacteroidota
GCC
Gly
>WENV181584764
OGKE01009335
23696
Bacteroidota
GCT
Ser
>WENV181584317
OGKE01000806
23696
Bacteroidota
GCT
Ser
>WENV181584605
OGKE01003380
20893
Bacteroidota
GGA
Ser
>WENV181583980
OGKE01000066
19317
Bacteroidota
GGA
Ser
>WENV181584392
OGKE01001198
16224
Bacteroidota
GGA
Ser
>WENV181584399
OGKE01001236
16220
Bacteroidota
GGA
Ser
>WENV181584014
OGKE01000093
144596
Bacteroidota
GGC
Ala
>WENV181584035
OGKE01000125
144655
Bacteroidota
GGC
Ala
>WENV181584112
OGKE01000238
143169
Bacteroidota
GGG
Pro
>WENV181584004
OGKE01000084
143169
Bacteroidota
GGG
Pro
>WENV181585044
OGKE01063338
338165
Bacteroidota
GGT
Thr
>WENV181584236
OGKE01000511
80607
Bacteroidota
GTA
Tyr
>WENV181584800
OGKE01011990
185921
Bacteroidota
GTC
Asp
>WENV181584776
OGKE01010086
144656
Bacteroidota
GTG
His
>WENV181584234
OGKE01000509
44852
Bacteroidota
TAA
Leu
>WENV181584713
OGKE01007431
95875
Bacteroidota
TAG
Leu
>WENV181584116
OGKE01000242
144933
Bacteroidota
TCT
Arg
>WENV181584945
OGKE01033891
45423
Bacteroidota
TGA
Ser
>WENV181584252
OGKE01000563
56823
Bacteroidota
TGA
Ser
>WENV181584006
OGKE01000085
56823
Bacteroidota
TGA
Ser
>WENV181584005
OGKE01000085
56823
Bacteroidota
TGA
Ser
>WENV181583922
OGKE01000016
56823
Bacteroidota
TGA
Ser
>WENV181584677
OGKE01005611
338164
Bacteroidota
TTC
Glu
>WENV181584047
OGKE01000147
353927
Bacteroidota
TTC
Glu
>WENV181584548
OGKE01002246
436206
Bacteroidota
TTG
Gln
>WENV181584102
OGKE01000217
436206
Bacteroidota
TTG
Gln
>WENV181584098
OGKE01000211
235097
Bacteroidota
TTT
Lys
>WENV181584744
OGKE01008690
280513
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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