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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
62 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181594464
OGKU01001678
117741
Bacteroidota
TAG
Leu
>WENV181594171
OGKU01000190
398829
Bacteroidota
CCT
Arg
>WENV181594371
OGKU01000907
398829
Bacteroidota
CCT
Arg
>WENV181594009
OGKU01000026
404226
Bacteroidota
CCT
Arg
>WENV181594121
OGKU01000126
404226
Bacteroidota
CCT
Arg
>WENV181594180
OGKU01000202
175904
Bacteroidota
CGG
Pro
>WENV181594136
OGKU01000143
400161
Bacteroidota
GGT
Thr
>WENV181594419
OGKU01001265
289031
Bacteroidota
CAT
Met
>WENV181594284
OGKU01000488
156422
Bacteroidota
TAC
Val
>WENV181594440
OGKU01001370
280557
Bacteroidota
CAT
Met
>WENV181594322
OGKU01000677
20492
Bacteroidota
GGA
Ser
>WENV181594276
OGKU01000438
20206
Bacteroidota
GGA
Ser
>WENV181594168
OGKU01000187
483416
Bacteroidota
CTG
Gln
>WENV181594120
OGKU01000126
398871
Bacteroidota
TTC
Glu
>WENV181594216
OGKU01000271
118221
Bacteroidota
CAA
Leu
>WENV181594147
OGKU01000153
56493
Bacteroidota
TGA
Ser
>WENV181594311
OGKU01000624
175906
Bacteroidota
GTG
His
>WENV181594118
OGKU01000120
175903
Bacteroidota
GTG
His
>WENV181594384
OGKU01000979
175903
Bacteroidota
GTG
His
>WENV181594029
OGKU01000035
156068
Bacteroidota
TAC
Val
>WENV181594215
OGKU01000265
118089
Bacteroidota
TAG
Leu
>WENV181594324
OGKU01000685
175908
Bacteroidota
GTC
Asp
>WENV181594181
OGKU01000202
280530
Bacteroidota
CCA
Trp
>WENV181594172
OGKU01000191
178907
Bacteroidota
TCT
Arg
>WENV181594150
OGKU01000157
56385
Bacteroidota
TGA
Ser
>WENV181594155
OGKU01000167
20449
Bacteroidota
GGA
Ser
>WENV181594137
OGKU01000143
312035
Bacteroidota
CCA
Trp
>WENV181594578
OGKU01005193
178133
Bacteroidota
GAT
Ile
>WENV181594332
OGKU01000731
57807
Bacteroidota
TGA
Ser
>WENV181594293
OGKU01000517
175902
Bacteroidota
GGC
Ala
>WENV181594299
OGKU01000532
280451
Bacteroidota
CGT
Thr
>WENV181594170
OGKU01000188
99847
Bacteroidota
GTA
Tyr
>WENV181594337
OGKU01000745
399200
Bacteroidota
CAT
Met
>WENV181594385
OGKU01000990
399200
Bacteroidota
CAT
Met
>WENV181594435
OGKU01001354
404109
Bacteroidota
CTC
Glu
>WENV181594436
OGKU01001354
404109
Bacteroidota
CTC
Glu
>WENV181594093
OGKU01000090
186874
Bacteroidota
CAT
Met
>WENV181594122
OGKU01000127
46648
Bacteroidota
TAA
Leu
>WENV181594036
OGKU01000038
332896
Bacteroidota
TTT
Lys
>WENV181594398
OGKU01001144
332896
Bacteroidota
TTT
Lys
>WENV181594494
OGKU01002100
332896
Bacteroidota
TTT
Lys
>WENV181594087
OGKU01000084
488746
Bacteroidota
CTG
Gln
>WENV181594296
OGKU01000521
280478
Bacteroidota
GCC
Gly
>WENV181594056
OGKU01000055
187400
Bacteroidota
GTT
Asn
>WENV181594462
OGKU01001622
175844
Bacteroidota
GGC
Ala
>WENV181594264
OGKU01000393
73011
Bacteroidota
CAA
Leu
>WENV181594279
OGKU01000469
187814
Bacteroidota
GTC
Asp
>WENV181594280
OGKU01000469
187814
Bacteroidota
GTC
Asp
>WENV181594305
OGKU01000577
183889
Bacteroidota
GGC
Ala
>WENV181594088
OGKU01000084
158068
Bacteroidota
GGG
Pro
>WENV181594490
OGKU01001999
158068
Bacteroidota
GGG
Pro
>WENV181594313
OGKU01000636
398828
Bacteroidota
CCG
Arg
>WENV181594297
OGKU01000521
74084
Bacteroidota
CAG
Leu
>WENV181594095
OGKU01000094
480325
Bacteroidota
CTG
Gln
>WENV181594154
OGKU01000164
176192
Bacteroidota
TCT
Arg
>WENV181594124
OGKU01000127
481328
Bacteroidota
TTG
Gln
>WENV181594191
OGKU01000224
280446
Bacteroidota
TTT
Lys
>WENV181594432
OGKU01001341
280446
Bacteroidota
TTT
Lys
>WENV181594189
OGKU01000216
484496
Bacteroidota
TTG
Gln
>WENV181594352
OGKU01000813
484496
Bacteroidota
TTG
Gln
>WENV181594308
OGKU01000608
285750
Bacteroidota
CCC
Gly
>WENV181594204
OGKU01000245
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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