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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
92 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181661258
OGOG01001875
341950
Bacteroidota
>WENV181660942
OGOG01000649
341950
Bacteroidota
>WENV181660763
OGOG01000299
80614
Bacteroidota
>WENV181660754
OGOG01000288
80614
Bacteroidota
>WENV181660474
OGOG01000002
80614
Bacteroidota
>WENV181660473
OGOG01000002
80614
Bacteroidota
>WENV181660543
OGOG01000032
243025
Bacteroidota
CAT
Met
>WENV181660722
OGOG01000235
243025
Bacteroidota
CAT
Met
>WENV181660967
OGOG01000725
338486
Bacteroidota
CAT
Met
>WENV181660855
OGOG01000454
338486
Bacteroidota
CAT
Met
>WENV181660913
OGOG01000578
148575
Bacteroidota
CAT
Met
>WENV181661153
OGOG01001382
144688
Bacteroidota
CAT
Met
>WENV181660966
OGOG01000714
235207
Bacteroidota
CAT
Met
>WENV181660640
OGOG01000121
235207
Bacteroidota
CAT
Met
>WENV181660476
OGOG01000003
235207
Bacteroidota
CAT
Met
>WENV181661101
OGOG01001251
154643
Bacteroidota
CAT
Met
>WENV181660616
OGOG01000092
154643
Bacteroidota
CAT
Met
>WENV181660605
OGOG01000078
154643
Bacteroidota
CAT
Met
>WENV181661637
OGOG01004763
280660
Bacteroidota
CCA
Trp
>WENV181661226
OGOG01001752
280660
Bacteroidota
CCA
Trp
>WENV181660676
OGOG01000154
240012
Bacteroidota
CCC
Gly
>WENV181660602
OGOG01000074
338124
Bacteroidota
CCG
Arg
>WENV181662403
OGOG01054823
338314
Bacteroidota
CCT
Arg
>WENV181660599
OGOG01000069
338125
Bacteroidota
CCT
Arg
>WENV181661664
OGOG01005113
144657
Bacteroidota
CGG
Pro
>WENV181662191
OGOG01022196
235102
Bacteroidota
CGT
Thr
>WENV181662156
OGOG01019139
272983
Bacteroidota
CGT
Thr
>WENV181660790
OGOG01000330
338155
Bacteroidota
CTC
Glu
>WENV181662047
OGOG01013413
338155
Bacteroidota
CTC
Glu
>WENV181661583
OGOG01004191
411543
Bacteroidota
CTG
Gln
>WENV181660618
OGOG01000106
419272
Bacteroidota
CTG
Gln
>WENV181660587
OGOG01000063
414426
Bacteroidota
CTG
Gln
>WENV181660573
OGOG01000049
414426
Bacteroidota
CTG
Gln
>WENV181660745
OGOG01000268
238121
Bacteroidota
CTT
Lys
>WENV181660744
OGOG01000268
238121
Bacteroidota
CTT
Lys
>WENV181660812
OGOG01000359
58715
Bacteroidota
GAG
Leu
>WENV181661677
OGOG01005417
338132
Bacteroidota
GCA
Cys
>WENV181661308
OGOG01002139
338132
Bacteroidota
GCA
Cys
>WENV181660983
OGOG01000793
338132
Bacteroidota
GCA
Cys
>WENV181660661
OGOG01000147
338132
Bacteroidota
GCA
Cys
>WENV181660478
OGOG01000005
338132
Bacteroidota
GCA
Cys
>WENV181660631
OGOG01000114
267954
Bacteroidota
GCC
Gly
>WENV181661176
OGOG01001468
267954
Bacteroidota
GCC
Gly
>WENV181660987
OGOG01000797
235129
Bacteroidota
GCC
Gly
>WENV181660985
OGOG01000797
235129
Bacteroidota
GCC
Gly
>WENV181660810
OGOG01000359
235129
Bacteroidota
GCC
Gly
>WENV181662200
OGOG01022708
17323
Bacteroidota
GGA
Ser
>WENV181661114
OGOG01001292
17323
Bacteroidota
GGA
Ser
>WENV181660863
OGOG01000465
19317
Bacteroidota
GGA
Ser
>WENV181660612
OGOG01000084
16220
Bacteroidota
GGA
Ser
>WENV181661762
OGOG01006550
181746
Bacteroidota
GGC
Ala
>WENV181660568
OGOG01000043
144655
Bacteroidota
GGC
Ala
>WENV181662324
OGOG01036916
151960
Bacteroidota
GGC
Ala
>WENV181660957
OGOG01000694
151960
Bacteroidota
GGC
Ala
>WENV181661729
OGOG01006062
132360
Bacteroidota
GGG
Pro
>WENV181661337
OGOG01002273
132360
Bacteroidota
GGG
Pro
>WENV181660684
OGOG01000168
132360
Bacteroidota
GGG
Pro
>WENV181660619
OGOG01000106
132360
Bacteroidota
GGG
Pro
>WENV181660755
OGOG01000288
339341
Bacteroidota
GGT
Thr
>WENV181661475
OGOG01003205
344692
Bacteroidota
GGT
Thr
>WENV181661450
OGOG01003050
344692
Bacteroidota
GGT
Thr
>WENV181661429
OGOG01002877
344692
Bacteroidota
GGT
Thr
>WENV181661468
OGOG01003156
80835
Bacteroidota
GTA
Tyr
>WENV181662278
OGOG01031124
80607
Bacteroidota
GTA
Tyr
>WENV181660598
OGOG01000068
80607
Bacteroidota
GTA
Tyr
>WENV181660764
OGOG01000299
179643
Bacteroidota
GTC
Asp
>WENV181662037
OGOG01013304
144656
Bacteroidota
GTG
His
>WENV181660769
OGOG01000310
144590
Bacteroidota
GTT
Asn
>WENV181660768
OGOG01000310
144590
Bacteroidota
GTT
Asn
>WENV181660614
OGOG01000087
44852
Bacteroidota
TAA
Leu
>WENV181660883
OGOG01000520
126641
Bacteroidota
TAC
Val
>WENV181660709
OGOG01000204
95559
Bacteroidota
TAG
Leu
>WENV181660636
OGOG01000118
95875
Bacteroidota
TAG
Leu
>WENV181661763
OGOG01006576
144933
Bacteroidota
TCT
Arg
>WENV181660761
OGOG01000295
144933
Bacteroidota
TCT
Arg
>WENV181660751
OGOG01000283
46165
Bacteroidota
TGA
Ser
>WENV181661597
OGOG01004388
48053
Bacteroidota
TGA
Ser
>WENV181661160
OGOG01001403
48053
Bacteroidota
TGA
Ser
>WENV181660950
OGOG01000674
48053
Bacteroidota
TGA
Ser
>WENV181660766
OGOG01000303
48053
Bacteroidota
TGA
Ser
>WENV181661467
OGOG01003156
146530
Bacteroidota
TGT
Thr
>WENV181662124
OGOG01016742
353927
Bacteroidota
TTC
Glu
>WENV181660901
OGOG01000553
353927
Bacteroidota
TTC
Glu
>WENV181660667
OGOG01000149
415410
Bacteroidota
TTG
Gln
>WENV181660577
OGOG01000053
415410
Bacteroidota
TTG
Gln
>WENV181660527
OGOG01000019
235097
Bacteroidota
TTT
Lys
>WENV181660851
OGOG01000445
235097
Bacteroidota
TTT
Lys
>WENV181660988
OGOG01000799
235097
Bacteroidota
TTT
Lys
>WENV181660746
OGOG01000269
280513
Bacteroidota
TTT
Lys
>WENV181661793
OGOG01007079
239647
Bacteroidota
TTT
Lys
>WENV181661679
OGOG01005504
239647
Bacteroidota
TTT
Lys
>WENV181661181
OGOG01001501
239647
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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