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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
57 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181784526
OGRM01000175
235097
Bacteroidota
TTT
Lys
>WENV181784680
OGRM01000562
235097
Bacteroidota
TTT
Lys
>WENV181784726
OGRM01000720
339412
Bacteroidota
GGT
Thr
>WENV181784482
OGRM01000122
235102
Bacteroidota
CGT
Thr
>WENV181784702
OGRM01000664
237796
Bacteroidota
CGT
Thr
>WENV181785070
OGRM01005407
144657
Bacteroidota
CGG
Pro
>WENV181785207
OGRM01010840
243025
Bacteroidota
CAT
Met
>WENV181784470
OGRM01000113
338155
Bacteroidota
CTC
Glu
>WENV181785121
OGRM01007194
58715
Bacteroidota
GAG
Leu
>WENV181785429
OGRM01028897
338486
Bacteroidota
CAT
Met
>WENV181785292
OGRM01015536
338486
Bacteroidota
CAT
Met
>WENV181784452
OGRM01000087
394247
Bacteroidota
CTC
Glu
>WENV181785040
OGRM01004417
413663
Bacteroidota
CTG
Gln
>WENV181785120
OGRM01007194
59689
Bacteroidota
CAG
Leu
>WENV181784735
OGRM01000761
436206
Bacteroidota
TTG
Gln
>WENV181784934
OGRM01002194
147147
Bacteroidota
GTG
His
>WENV181784642
OGRM01000438
155123
Bacteroidota
GTT
Asn
>WENV181784604
OGRM01000346
338124
Bacteroidota
CCG
Arg
>WENV181785266
OGRM01013699
235203
Bacteroidota
TTT
Lys
>WENV181785129
OGRM01007397
338132
Bacteroidota
GCA
Cys
>WENV181784541
OGRM01000194
338132
Bacteroidota
GCA
Cys
>WENV181784514
OGRM01000153
338132
Bacteroidota
GCA
Cys
>WENV181785323
OGRM01017816
45423
Bacteroidota
TGA
Ser
>WENV181785213
OGRM01011520
46489
Bacteroidota
TGA
Ser
>WENV181785529
OGRM01043979
58714
Bacteroidota
CAA
Leu
>WENV181784825
OGRM01001236
301449
Bacteroidota
CGG
Pro
>WENV181784793
OGRM01001060
144656
Bacteroidota
GTG
His
>WENV181784390
OGRM01000028
235207
Bacteroidota
CAT
Met
>WENV181785171
OGRM01009083
144659
Bacteroidota
GTG
His
>WENV181785154
OGRM01008263
144596
Bacteroidota
GGC
Ala
>WENV181784565
OGRM01000236
80607
Bacteroidota
GTA
Tyr
>WENV181784503
OGRM01000136
412235
Bacteroidota
>WENV181784521
OGRM01000167
154643
Bacteroidota
CAT
Met
>WENV181784445
OGRM01000084
144655
Bacteroidota
GGC
Ala
>WENV181785638
OGRM01076018
338164
Bacteroidota
TTC
Glu
>WENV181785272
OGRM01014203
95875
Bacteroidota
TAG
Leu
>WENV181785203
OGRM01010763
240012
Bacteroidota
CCC
Gly
>WENV181784574
OGRM01000262
44852
Bacteroidota
TAA
Leu
>WENV181785232
OGRM01012294
147439
Bacteroidota
TCT
Arg
>WENV181784558
OGRM01000212
150485
Bacteroidota
GTT
Asn
>WENV181784557
OGRM01000212
150485
Bacteroidota
GTT
Asn
>WENV181784556
OGRM01000212
150485
Bacteroidota
GTT
Asn
>WENV181784725
OGRM01000720
95986
Bacteroidota
GTA
Tyr
>WENV181784591
OGRM01000318
425638
Bacteroidota
CTG
Gln
>WENV181784375
OGRM01000014
425638
Bacteroidota
CTG
Gln
>WENV181784696
OGRM01000653
239647
Bacteroidota
TTT
Lys
>WENV181784677
OGRM01000537
353927
Bacteroidota
TTC
Glu
>WENV181785353
OGRM01019135
23696
Bacteroidota
GCT
Ser
>WENV181784894
OGRM01001781
414426
Bacteroidota
CTG
Gln
>WENV181784450
OGRM01000087
146764
Bacteroidota
GTC
Asp
>WENV181784665
OGRM01000522
56823
Bacteroidota
TGA
Ser
>WENV181784600
OGRM01000328
56823
Bacteroidota
TGA
Ser
>WENV181784578
OGRM01000279
16224
Bacteroidota
GGA
Ser
>WENV181784412
OGRM01000048
127023
Bacteroidota
GGG
Pro
>WENV181784794
OGRM01001062
338125
Bacteroidota
CCT
Arg
>WENV181785119
OGRM01007194
235129
Bacteroidota
GCC
Gly
>WENV181784920
OGRM01002005
235129
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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