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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
46 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181880253
OGXG01000027
175903
Bacteroidota
GTG
His
>WENV181880309
OGXG01000139
398829
Bacteroidota
CCT
Arg
>WENV181880310
OGXG01000143
398828
Bacteroidota
CCG
Arg
>WENV181880362
OGXG01000296
175844
Bacteroidota
GGC
Ala
>WENV181880386
OGXG01000455
117741
Bacteroidota
TAG
Leu
>WENV181880400
OGXG01000516
175902
Bacteroidota
GGC
Ala
>WENV181880426
OGXG01000666
186874
Bacteroidota
CAT
Met
>WENV181880468
OGXG01000933
280557
Bacteroidota
CAT
Met
>WENV181880489
OGXG01001026
27502
Bacteroidota
GGA
Ser
>WENV181880496
OGXG01001080
69204
Bacteroidota
TGA
Ser
>WENV181880501
OGXG01001150
99847
Bacteroidota
GTA
Tyr
>WENV181880505
OGXG01001205
365112
Bacteroidota
TTT
Lys
>WENV181880506
OGXG01001206
488746
Bacteroidota
CTG
Gln
>WENV181880508
OGXG01001254
56493
Bacteroidota
TGA
Ser
>WENV181880543
OGXG01001514
99847
Bacteroidota
GTA
Tyr
>WENV181880551
OGXG01001555
365112
Bacteroidota
TTT
Lys
>WENV181880578
OGXG01001947
365112
Bacteroidota
TTT
Lys
>WENV181880604
OGXG01002628
175838
Bacteroidota
GTT
Asn
>WENV181880624
OGXG01003013
20206
Bacteroidota
GGA
Ser
>WENV181880637
OGXG01003148
182267
Bacteroidota
GTT
Asn
>WENV181880663
OGXG01003943
172207
Bacteroidota
GGG
Pro
>WENV181880666
OGXG01003975
289031
Bacteroidota
CAT
Met
>WENV181880687
OGXG01004722
242241
Bacteroidota
GTC
Asp
>WENV181880689
OGXG01004759
280451
Bacteroidota
CGT
Thr
>WENV181880692
OGXG01004841
398829
Bacteroidota
CCT
Arg
>WENV181880691
OGXG01004841
280557
Bacteroidota
CAT
Met
>WENV181880704
OGXG01005082
398836
Bacteroidota
GCA
Cys
>WENV181880713
OGXG01005254
398836
Bacteroidota
GCA
Cys
>WENV181880731
OGXG01006073
351598
Bacteroidota
CGG
Pro
>WENV181880752
OGXG01006644
46648
Bacteroidota
TAA
Leu
>WENV181880771
OGXG01007204
400161
Bacteroidota
GGT
Thr
>WENV181880772
OGXG01007204
312035
Bacteroidota
CCA
Trp
>WENV181880775
OGXG01007357
398828
Bacteroidota
CCG
Arg
>WENV181880777
OGXG01007499
483416
Bacteroidota
CTG
Gln
>WENV181880781
OGXG01007644
484496
Bacteroidota
TTG
Gln
>WENV181880784
OGXG01007700
488746
Bacteroidota
CTG
Gln
>WENV181880800
OGXG01008633
398836
Bacteroidota
GCA
Cys
>WENV181880868
OGXG01011318
418894
Bacteroidota
TTC
Glu
>WENV181880893
OGXG01013636
365112
Bacteroidota
TTT
Lys
>WENV181880928
OGXG01015416
56385
Bacteroidota
TGA
Ser
>WENV181881079
OGXG01031550
20449
Bacteroidota
GGA
Ser
>WENV181881107
OGXG01035074
118221
Bacteroidota
CAA
Leu
>WENV181881118
OGXG01037794
481328
Bacteroidota
TTG
Gln
>WENV181881129
OGXG01040641
172085
Bacteroidota
TAC
Val
>WENV181881133
OGXG01041102
20492
Bacteroidota
GGA
Ser
>WENV181881238
OGXG01072132
399200
Bacteroidota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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