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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
57 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182047746
OHDZ01000001
398829
Bacteroidota
CCT
Arg
>WENV182047747
OHDZ01000002
398828
Bacteroidota
CCG
Arg
>WENV182047749
OHDZ01000003
118221
Bacteroidota
CAA
Leu
>WENV182047756
OHDZ01000009
156422
Bacteroidota
TAC
Val
>WENV182047757
OHDZ01000009
172085
Bacteroidota
TAC
Val
>WENV182047761
OHDZ01000010
242241
Bacteroidota
GTC
Asp
>WENV182047762
OHDZ01000011
484496
Bacteroidota
TTG
Gln
>WENV182047766
OHDZ01000015
400161
Bacteroidota
GGT
Thr
>WENV182047767
OHDZ01000015
312035
Bacteroidota
CCA
Trp
>WENV182047768
OHDZ01000017
351598
Bacteroidota
CGG
Pro
>WENV182047770
OHDZ01000018
57807
Bacteroidota
TGA
Ser
>WENV182047772
OHDZ01000019
46648
Bacteroidota
TAA
Leu
>WENV182047771
OHDZ01000019
481328
Bacteroidota
TTG
Gln
>WENV182047775
OHDZ01000022
56493
Bacteroidota
TGA
Ser
>WENV182047776
OHDZ01000023
280451
Bacteroidota
CGT
Thr
>WENV182047777
OHDZ01000025
280446
Bacteroidota
TTT
Lys
>WENV182047781
OHDZ01000028
20206
Bacteroidota
GGA
Ser
>WENV182047780
OHDZ01000028
488746
Bacteroidota
CTG
Gln
>WENV182047785
OHDZ01000029
175902
Bacteroidota
GGC
Ala
>WENV182047791
OHDZ01000036
99847
Bacteroidota
GTA
Tyr
>WENV182047795
OHDZ01000048
398836
Bacteroidota
GCA
Cys
>WENV182047800
OHDZ01000057
117741
Bacteroidota
TAG
Leu
>WENV182047801
OHDZ01000059
280557
Bacteroidota
CAT
Met
>WENV182047804
OHDZ01000062
56385
Bacteroidota
TGA
Ser
>WENV182047818
OHDZ01000113
175903
Bacteroidota
GTG
His
>WENV182047847
OHDZ01000225
27502
Bacteroidota
GGA
Ser
>WENV182047848
OHDZ01000233
289031
Bacteroidota
CAT
Met
>WENV182047864
OHDZ01000312
175904
Bacteroidota
CGG
Pro
>WENV182047865
OHDZ01000312
280530
Bacteroidota
CCA
Trp
>WENV182047867
OHDZ01000318
404109
Bacteroidota
CTC
Glu
>WENV182047868
OHDZ01000318
404109
Bacteroidota
CTC
Glu
>WENV182047880
OHDZ01000392
404226
Bacteroidota
CCT
Arg
>WENV182047881
OHDZ01000397
186874
Bacteroidota
CAT
Met
>WENV182047921
OHDZ01000644
399200
Bacteroidota
CAT
Met
>WENV182047924
OHDZ01000658
170323
Bacteroidota
GGG
Pro
>WENV182047929
OHDZ01000697
242241
Bacteroidota
GTC
Asp
>WENV182047930
OHDZ01000709
20449
Bacteroidota
GGA
Ser
>WENV182047934
OHDZ01000756
178907
Bacteroidota
TCT
Arg
>WENV182047937
OHDZ01000859
280478
Bacteroidota
GCC
Gly
>WENV182047948
OHDZ01001017
365112
Bacteroidota
TTT
Lys
>WENV182047949
OHDZ01001033
73011
Bacteroidota
CAA
Leu
>WENV182047958
OHDZ01001099
480325
Bacteroidota
CTG
Gln
>WENV182047962
OHDZ01001148
398871
Bacteroidota
TTC
Glu
>WENV182047976
OHDZ01001373
483416
Bacteroidota
CTG
Gln
>WENV182047977
OHDZ01001417
74084
Bacteroidota
CAG
Leu
>WENV182047983
OHDZ01001568
295385
Bacteroidota
CCA
Trp
>WENV182047995
OHDZ01001724
289031
Bacteroidota
CAT
Met
>WENV182048028
OHDZ01002225
285750
Bacteroidota
CCC
Gly
>WENV182048039
OHDZ01002408
118089
Bacteroidota
TAG
Leu
>WENV182048094
OHDZ01004178
399200
Bacteroidota
CAT
Met
>WENV182048159
OHDZ01006846
186874
Bacteroidota
CAT
Met
>WENV182048165
OHDZ01007226
405877
Bacteroidota
GGT
Thr
>WENV182048207
OHDZ01010409
203954
Bacteroidota
GTC
Asp
>WENV182048244
OHDZ01013492
480404
Bacteroidota
TTG
Gln
>WENV182048258
OHDZ01014972
400088
Bacteroidota
GGT
Thr
>WENV182048299
OHDZ01021943
175906
Bacteroidota
GTG
His
>WENV182048328
OHDZ01030802
291612
Bacteroidota
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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