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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182053533
OHEJ01000025
400161
Bacteroidota
GGT
Thr
>WENV182053534
OHEJ01000025
312035
Bacteroidota
CCA
Trp
>WENV182053544
OHEJ01000037
481328
Bacteroidota
TTG
Gln
>WENV182053562
OHEJ01000051
56385
Bacteroidota
TGA
Ser
>WENV182053571
OHEJ01000069
242241
Bacteroidota
GTC
Asp
>WENV182053590
OHEJ01000096
46648
Bacteroidota
TAA
Leu
>WENV182053594
OHEJ01000113
118221
Bacteroidota
CAA
Leu
>WENV182053596
OHEJ01000114
404109
Bacteroidota
CTC
Glu
>WENV182053716
OHEJ01000579
283315
Bacteroidota
CGT
Thr
>WENV182053720
OHEJ01000593
404109
Bacteroidota
CTC
Glu
>WENV182053725
OHEJ01000636
242241
Bacteroidota
GTC
Asp
>WENV182053728
OHEJ01000692
481044
Bacteroidota
>WENV182053764
OHEJ01001237
175886
Bacteroidota
GGC
Ala
>WENV182053767
OHEJ01001267
156128
Bacteroidota
GGG
Pro
>WENV182053778
OHEJ01001632
56385
Bacteroidota
TGA
Ser
>WENV182053780
OHEJ01001649
484496
Bacteroidota
TTG
Gln
>WENV182053801
OHEJ01001890
178134
Bacteroidota
TGG
Pro
>WENV182053805
OHEJ01002026
157895
Bacteroidota
TAC
Val
>WENV182053874
OHEJ01003806
158068
Bacteroidota
GGG
Pro
>WENV182053904
OHEJ01004713
187814
Bacteroidota
GTC
Asp
>WENV182053909
OHEJ01004965
175902
Bacteroidota
GGC
Ala
>WENV182053933
OHEJ01006328
117741
Bacteroidota
TAG
Leu
>WENV182053962
OHEJ01007906
399026
Bacteroidota
CCT
Arg
>WENV182053977
OHEJ01008619
140771
Bacteroidota
>WENV182053981
OHEJ01008669
117804
Bacteroidota
TAG
Leu
>WENV182053982
OHEJ01008998
172085
Bacteroidota
TAC
Val
>WENV182053990
OHEJ01010011
483416
Bacteroidota
CTG
Gln
>WENV182054043
OHEJ01010987
20206
Bacteroidota
GGA
Ser
>WENV182054115
OHEJ01014391
27502
Bacteroidota
GGA
Ser
>WENV182054126
OHEJ01015487
398836
Bacteroidota
GCA
Cys
>WENV182054313
OHEJ01042900
56493
Bacteroidota
TGA
Ser
>WENV182054333
OHEJ01048767
175903
Bacteroidota
GTG
His
>WENV182054335
OHEJ01049518
186874
Bacteroidota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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