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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182091930
OHHG01000149
243025
Bacteroidota
CAT
Met
>WENV182091964
OHHG01000245
17323
Bacteroidota
GGA
Ser
>WENV182092062
OHHG01001176
415410
Bacteroidota
TTG
Gln
>WENV182091879
OHHG01000036
344692
Bacteroidota
GGT
Thr
>WENV182092061
OHHG01001175
341950
Bacteroidota
>WENV182092198
OHHG01006516
80607
Bacteroidota
GTA
Tyr
>WENV182092366
OHHG01038333
80614
Bacteroidota
>WENV182091986
OHHG01000384
154643
Bacteroidota
CAT
Met
>WENV182092234
OHHG01010996
95559
Bacteroidota
TAG
Leu
>WENV182092277
OHHG01018684
144655
Bacteroidota
GGC
Ala
>WENV182092125
OHHG01002329
44852
Bacteroidota
TAA
Leu
>WENV182092158
OHHG01004026
132360
Bacteroidota
GGG
Pro
>WENV182092142
OHHG01003068
353927
Bacteroidota
TTC
Glu
>WENV182091857
OHHG01000009
414426
Bacteroidota
CTG
Gln
>WENV182092229
OHHG01010187
16220
Bacteroidota
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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