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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
31 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182096881
OHHO01000709
172207
Bacteroidota
GGG
Pro
>WENV182097075
OHHO01003922
172207
Bacteroidota
GGG
Pro
>WENV182097002
OHHO01002291
117741
Bacteroidota
TAG
Leu
>WENV182096841
OHHO01000339
175838
Bacteroidota
GTT
Asn
>WENV182097022
OHHO01002697
400161
Bacteroidota
GGT
Thr
>WENV182096834
OHHO01000318
289031
Bacteroidota
CAT
Met
>WENV182096840
OHHO01000333
156422
Bacteroidota
TAC
Val
>WENV182096839
OHHO01000333
156422
Bacteroidota
TAC
Val
>WENV182096862
OHHO01000459
280557
Bacteroidota
CAT
Met
>WENV182096731
OHHO01000013
483416
Bacteroidota
CTG
Gln
>WENV182097331
OHHO01022575
201819
Bacteroidota
CAT
Met
>WENV182096734
OHHO01000025
118221
Bacteroidota
CAA
Leu
>WENV182096800
OHHO01000166
178571
Bacteroidota
GTT
Asn
>WENV182096789
OHHO01000133
172085
Bacteroidota
TAC
Val
>WENV182096849
OHHO01000377
56385
Bacteroidota
TGA
Ser
>WENV182096811
OHHO01000204
56385
Bacteroidota
TGA
Ser
>WENV182097023
OHHO01002697
312035
Bacteroidota
CCA
Trp
>WENV182097006
OHHO01002423
175902
Bacteroidota
GGC
Ala
>WENV182096980
OHHO01001946
283315
Bacteroidota
CGT
Thr
>WENV182096750
OHHO01000047
156128
Bacteroidota
GGG
Pro
>WENV182096745
OHHO01000035
404109
Bacteroidota
CTC
Glu
>WENV182096752
OHHO01000050
186874
Bacteroidota
CAT
Met
>WENV182096817
OHHO01000238
46648
Bacteroidota
TAA
Leu
>WENV182097269
OHHO01014740
178179
Bacteroidota
GGC
Ala
>WENV182096816
OHHO01000237
178134
Bacteroidota
TGG
Pro
>WENV182096801
OHHO01000186
481044
Bacteroidota
>WENV182096775
OHHO01000100
481328
Bacteroidota
TTG
Gln
>WENV182097097
OHHO01004480
69204
Bacteroidota
TGA
Ser
>WENV182096875
OHHO01000625
484496
Bacteroidota
TTG
Gln
>WENV182097093
OHHO01004448
27502
Bacteroidota
GGA
Ser
>WENV182097280
OHHO01016258
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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