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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182152081
OHLL01000006
338125
Bacteroidota
CCT
Arg
>WENV182152085
OHLL01000008
16224
Bacteroidota
GGA
Ser
>WENV182152088
OHLL01000010
48053
Bacteroidota
TGA
Ser
>WENV182152093
OHLL01000011
338132
Bacteroidota
GCA
Cys
>WENV182152100
OHLL01000020
132360
Bacteroidota
GGG
Pro
>WENV182152106
OHLL01000029
144656
Bacteroidota
GTG
His
>WENV182152107
OHLL01000029
16224
Bacteroidota
GGA
Ser
>WENV182152111
OHLL01000036
235102
Bacteroidota
CGT
Thr
>WENV182152112
OHLL01000037
415410
Bacteroidota
TTG
Gln
>WENV182152118
OHLL01000044
48053
Bacteroidota
TGA
Ser
>WENV182152123
OHLL01000048
144655
Bacteroidota
GGC
Ala
>WENV182152130
OHLL01000056
132360
Bacteroidota
GGG
Pro
>WENV182152131
OHLL01000064
23696
Bacteroidota
GCT
Ser
>WENV182152132
OHLL01000064
338155
Bacteroidota
CTC
Glu
>WENV182152137
OHLL01000068
338125
Bacteroidota
CCT
Arg
>WENV182152138
OHLL01000069
415410
Bacteroidota
TTG
Gln
>WENV182152145
OHLL01000072
80607
Bacteroidota
GTA
Tyr
>WENV182152153
OHLL01000086
338124
Bacteroidota
CCG
Arg
>WENV182152168
OHLL01000117
144933
Bacteroidota
TCT
Arg
>WENV182152220
OHLL01000209
95559
Bacteroidota
TAG
Leu
>WENV182152222
OHLL01000218
419272
Bacteroidota
CTG
Gln
>WENV182152235
OHLL01000288
16220
Bacteroidota
GGA
Ser
>WENV182152241
OHLL01000310
48053
Bacteroidota
TGA
Ser
>WENV182152266
OHLL01000456
235207
Bacteroidota
CAT
Met
>WENV182152270
OHLL01000482
411543
Bacteroidota
CTG
Gln
>WENV182152275
OHLL01000538
144590
Bacteroidota
GTT
Asn
>WENV182152280
OHLL01000551
144688
Bacteroidota
CAT
Met
>WENV182152283
OHLL01000561
338132
Bacteroidota
GCA
Cys
>WENV182152290
OHLL01000618
235182
Bacteroidota
>WENV182152312
OHLL01000912
411629
Bacteroidota
TTG
Gln
>WENV182152321
OHLL01001099
48053
Bacteroidota
TGA
Ser
>WENV182152326
OHLL01001177
415410
Bacteroidota
TTG
Gln
>WENV182152370
OHLL01002567
338314
Bacteroidota
CCT
Arg
>WENV182152417
OHLL01004939
181746
Bacteroidota
GGC
Ala
>WENV182152496
OHLL01015352
95618
Bacteroidota
TAG
Leu
>WENV182152548
OHLL01026555
243025
Bacteroidota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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