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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182160237
OHME01000189
235097
Bacteroidota
TTT
Lys
>WENV182160290
OHME01000309
235097
Bacteroidota
TTT
Lys
>WENV182160220
OHME01000151
235102
Bacteroidota
CGT
Thr
>WENV182160400
OHME01000920
243025
Bacteroidota
CAT
Met
>WENV182160601
OHME01007677
17323
Bacteroidota
GGA
Ser
>WENV182160175
OHME01000071
415410
Bacteroidota
TTG
Gln
>WENV182160205
OHME01000127
415410
Bacteroidota
TTG
Gln
>WENV182160759
OHME01031865
411543
Bacteroidota
CTG
Gln
>WENV182160786
OHME01040117
59689
Bacteroidota
CAG
Leu
>WENV182160120
OHME01000014
338124
Bacteroidota
CCG
Arg
>WENV182160276
OHME01000272
126641
Bacteroidota
TAC
Val
>WENV182160150
OHME01000035
338132
Bacteroidota
GCA
Cys
>WENV182160651
OHME01013137
144688
Bacteroidota
CAT
Met
>WENV182160245
OHME01000217
280660
Bacteroidota
CCA
Trp
>WENV182160283
OHME01000285
301449
Bacteroidota
CGG
Pro
>WENV182160688
OHME01017564
144933
Bacteroidota
TCT
Arg
>WENV182160246
OHME01000226
144656
Bacteroidota
GTG
His
>WENV182160240
OHME01000211
235207
Bacteroidota
CAT
Met
>WENV182160676
OHME01015862
235180
Bacteroidota
CCA
Trp
>WENV182160110
OHME01000004
80607
Bacteroidota
GTA
Tyr
>WENV182160534
OHME01003976
52358
Bacteroidota
TGA
Ser
>WENV182160504
OHME01002835
154643
Bacteroidota
CAT
Met
>WENV182160381
OHME01000829
144590
Bacteroidota
GTT
Asn
>WENV182160382
OHME01000829
144590
Bacteroidota
GTT
Asn
>WENV182160383
OHME01000829
144590
Bacteroidota
GTT
Asn
>WENV182160223
OHME01000154
95559
Bacteroidota
TAG
Leu
>WENV182160135
OHME01000023
419272
Bacteroidota
CTG
Gln
>WENV182160236
OHME01000187
144655
Bacteroidota
GGC
Ala
>WENV182160796
OHME01044502
338314
Bacteroidota
CCT
Arg
>WENV182160685
OHME01017421
411550
Bacteroidota
CTG
Gln
>WENV182160686
OHME01017421
411550
Bacteroidota
CTG
Gln
>WENV182160134
OHME01000023
132360
Bacteroidota
GGG
Pro
>WENV182160342
OHME01000532
425638
Bacteroidota
CTG
Gln
>WENV182160405
OHME01000981
425638
Bacteroidota
CTG
Gln
>WENV182160600
OHME01007607
425638
Bacteroidota
CTG
Gln
>WENV182160425
OHME01001215
239647
Bacteroidota
TTT
Lys
>WENV182160490
OHME01002355
414426
Bacteroidota
CTG
Gln
>WENV182160247
OHME01000226
16224
Bacteroidota
GGA
Ser
>WENV182160136
OHME01000023
16220
Bacteroidota
GGA
Ser
>WENV182160106
OHME01000003
338125
Bacteroidota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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