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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182218214
OHQQ01000001
280557
Bacteroidota
CAT
Met
>WENV182218215
OHQQ01000002
27502
Bacteroidota
GGA
Ser
>WENV182218224
OHQQ01000006
398836
Bacteroidota
GCA
Cys
>WENV182218231
OHQQ01000013
398836
Bacteroidota
GCA
Cys
>WENV182218254
OHQQ01000050
182267
Bacteroidota
GTT
Asn
>WENV182218256
OHQQ01000053
280446
Bacteroidota
TTT
Lys
>WENV182218263
OHQQ01000062
99847
Bacteroidota
GTA
Tyr
>WENV182218266
OHQQ01000066
27502
Bacteroidota
GGA
Ser
>WENV182218280
OHQQ01000096
484496
Bacteroidota
TTG
Gln
>WENV182218287
OHQQ01000098
351598
Bacteroidota
CGG
Pro
>WENV182218288
OHQQ01000099
172207
Bacteroidota
GGG
Pro
>WENV182218299
OHQQ01000104
398829
Bacteroidota
CCT
Arg
>WENV182218307
OHQQ01000113
280446
Bacteroidota
TTT
Lys
>WENV182218324
OHQQ01000142
398836
Bacteroidota
GCA
Cys
>WENV182218347
OHQQ01000204
56493
Bacteroidota
TGA
Ser
>WENV182218348
OHQQ01000211
175902
Bacteroidota
GGC
Ala
>WENV182218354
OHQQ01000226
20206
Bacteroidota
GGA
Ser
>WENV182218365
OHQQ01000250
398828
Bacteroidota
CCG
Arg
>WENV182218374
OHQQ01000289
175838
Bacteroidota
GTT
Asn
>WENV182218376
OHQQ01000297
280446
Bacteroidota
TTT
Lys
>WENV182218377
OHQQ01000299
172207
Bacteroidota
GGG
Pro
>WENV182218390
OHQQ01000338
176192
Bacteroidota
TCT
Arg
>WENV182218396
OHQQ01000355
289031
Bacteroidota
CAT
Met
>WENV182218400
OHQQ01000367
69204
Bacteroidota
TGA
Ser
>WENV182218405
OHQQ01000380
280446
Bacteroidota
TTT
Lys
>WENV182218414
OHQQ01000391
488746
Bacteroidota
CTG
Gln
>WENV182218423
OHQQ01000425
280446
Bacteroidota
TTT
Lys
>WENV182218434
OHQQ01000466
118089
Bacteroidota
TAG
Leu
>WENV182218447
OHQQ01000519
280451
Bacteroidota
CGT
Thr
>WENV182218450
OHQQ01000526
186874
Bacteroidota
CAT
Met
>WENV182218457
OHQQ01000560
175903
Bacteroidota
GTG
His
>WENV182218503
OHQQ01000741
484496
Bacteroidota
TTG
Gln
>WENV182218509
OHQQ01000765
351598
Bacteroidota
CGG
Pro
>WENV182218516
OHQQ01000835
483416
Bacteroidota
CTG
Gln
>WENV182218534
OHQQ01000959
73011
Bacteroidota
CAA
Leu
>WENV182218564
OHQQ01001142
480318
Bacteroidota
CTG
Gln
>WENV182218565
OHQQ01001147
117741
Bacteroidota
TAG
Leu
>WENV182218600
OHQQ01001535
280478
Bacteroidota
GCC
Gly
>WENV182218675
OHQQ01002451
365112
Bacteroidota
TTT
Lys
>WENV182218702
OHQQ01002983
178907
Bacteroidota
TCT
Arg
>WENV182218737
OHQQ01004369
295385
Bacteroidota
CCA
Trp
>WENV182218782
OHQQ01006586
175904
Bacteroidota
CGG
Pro
>WENV182218856
OHQQ01013528
159415
Bacteroidota
TAC
Val
>WENV182218920
OHQQ01030771
175908
Bacteroidota
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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