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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
52 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182343796
OIAL01000016
404109
Bacteroidota
CTC
Glu
>WENV182343797
OIAL01000016
178134
Bacteroidota
TGG
Pro
>WENV182343827
OIAL01000052
400161
Bacteroidota
GGT
Thr
>WENV182343831
OIAL01000054
398829
Bacteroidota
CCT
Arg
>WENV182343833
OIAL01000055
289031
Bacteroidota
CAT
Met
>WENV182343837
OIAL01000058
158068
Bacteroidota
GGG
Pro
>WENV182343838
OIAL01000058
488746
Bacteroidota
CTG
Gln
>WENV182343849
OIAL01000070
398828
Bacteroidota
CCG
Arg
>WENV182343850
OIAL01000075
284237
Bacteroidota
TTT
Lys
>WENV182343854
OIAL01000081
57807
Bacteroidota
TGA
Ser
>WENV182343856
OIAL01000087
332896
Bacteroidota
TTT
Lys
>WENV182343877
OIAL01000129
484496
Bacteroidota
TTG
Gln
>WENV182343878
OIAL01000130
175903
Bacteroidota
GTG
His
>WENV182343879
OIAL01000134
332896
Bacteroidota
TTT
Lys
>WENV182343885
OIAL01000141
157895
Bacteroidota
TAC
Val
>WENV182343891
OIAL01000157
280557
Bacteroidota
CAT
Met
>WENV182343896
OIAL01000166
46648
Bacteroidota
TAA
Leu
>WENV182343905
OIAL01000181
56493
Bacteroidota
TGA
Ser
>WENV182343908
OIAL01000192
99847
Bacteroidota
GTA
Tyr
>WENV182343915
OIAL01000207
56385
Bacteroidota
TGA
Ser
>WENV182343928
OIAL01000242
483416
Bacteroidota
CTG
Gln
>WENV182343929
OIAL01000250
175838
Bacteroidota
GTT
Asn
>WENV182343930
OIAL01000251
117741
Bacteroidota
TAG
Leu
>WENV182343939
OIAL01000274
186874
Bacteroidota
CAT
Met
>WENV182343951
OIAL01000295
20206
Bacteroidota
GGA
Ser
>WENV182343959
OIAL01000315
178571
Bacteroidota
GTT
Asn
>WENV182344007
OIAL01000603
481328
Bacteroidota
TTG
Gln
>WENV182344040
OIAL01001022
56072
Bacteroidota
TAA
Leu
>WENV182344093
OIAL01001775
175902
Bacteroidota
GGC
Ala
>WENV182344135
OIAL01002840
20449
Bacteroidota
GGA
Ser
>WENV182344137
OIAL01002942
73011
Bacteroidota
CAA
Leu
>WENV182344145
OIAL01003046
156068
Bacteroidota
TAC
Val
>WENV182344172
OIAL01003904
118089
Bacteroidota
TAG
Leu
>WENV182344215
OIAL01005186
280478
Bacteroidota
GCC
Gly
>WENV182344221
OIAL01005274
280530
Bacteroidota
CCA
Trp
>WENV182344235
OIAL01006032
404226
Bacteroidota
CCT
Arg
>WENV182344245
OIAL01006291
74084
Bacteroidota
CAG
Leu
>WENV182344267
OIAL01007563
178133
Bacteroidota
GAT
Ile
>WENV182344271
OIAL01007631
295385
Bacteroidota
CCA
Trp
>WENV182344282
OIAL01008288
398836
Bacteroidota
GCA
Cys
>WENV182344299
OIAL01009432
285360
Bacteroidota
TTT
Lys
>WENV182344308
OIAL01009829
57807
Bacteroidota
TGA
Ser
>WENV182344331
OIAL01012261
480404
Bacteroidota
TTG
Gln
>WENV182344336
OIAL01012698
399200
Bacteroidota
CAT
Met
>WENV182344367
OIAL01015268
398871
Bacteroidota
TTC
Glu
>WENV182344373
OIAL01015603
182267
Bacteroidota
GTT
Asn
>WENV182344399
OIAL01017615
183889
Bacteroidota
GGC
Ala
>WENV182344443
OIAL01022818
175944
Bacteroidota
CAT
Met
>WENV182344469
OIAL01028701
285750
Bacteroidota
CCC
Gly
>WENV182344470
OIAL01028721
175904
Bacteroidota
CGG
Pro
>WENV182344532
OIAL01042012
418894
Bacteroidota
TTC
Glu
>WENV182344567
OIAL01050708
280451
Bacteroidota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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