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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
52 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182410363
OIFL01000019
117741
Bacteroidota
TAG
Leu
>WENV182410352
OIFL01000013
398829
Bacteroidota
CCT
Arg
>WENV182410368
OIFL01000024
175838
Bacteroidota
GTT
Asn
>WENV182410369
OIFL01000024
175838
Bacteroidota
GTT
Asn
>WENV182410520
OIFL01001914
175838
Bacteroidota
GTT
Asn
>WENV182410618
OIFL01008558
289031
Bacteroidota
CAT
Met
>WENV182410380
OIFL01000034
280557
Bacteroidota
CAT
Met
>WENV182410498
OIFL01001383
280557
Bacteroidota
CAT
Met
>WENV182410409
OIFL01000216
20492
Bacteroidota
GGA
Ser
>WENV182410541
OIFL01002737
20492
Bacteroidota
GGA
Ser
>WENV182410709
OIFL01024635
20492
Bacteroidota
GGA
Ser
>WENV182410356
OIFL01000014
20206
Bacteroidota
GGA
Ser
>WENV182410705
OIFL01024493
398871
Bacteroidota
TTC
Glu
>WENV182410706
OIFL01024493
398871
Bacteroidota
TTC
Glu
>WENV182410332
OIFL01000001
201819
Bacteroidota
CAT
Met
>WENV182410336
OIFL01000002
56493
Bacteroidota
TGA
Ser
>WENV182410535
OIFL01002298
56493
Bacteroidota
TGA
Ser
>WENV182410337
OIFL01000002
175903
Bacteroidota
GTG
His
>WENV182410608
OIFL01006596
118089
Bacteroidota
TAG
Leu
>WENV182410590
OIFL01004829
29791
Bacteroidota
GCT
Ser
>WENV182410602
OIFL01005881
20449
Bacteroidota
GGA
Ser
>WENV182410434
OIFL01000395
178133
Bacteroidota
GAT
Ile
>WENV182410354
OIFL01000013
56072
Bacteroidota
TAA
Leu
>WENV182410485
OIFL01001142
57807
Bacteroidota
TGA
Ser
>WENV182410343
OIFL01000004
175902
Bacteroidota
GGC
Ala
>WENV182410591
OIFL01004829
398860
Bacteroidota
CTC
Glu
>WENV182410338
OIFL01000003
280451
Bacteroidota
CGT
Thr
>WENV182410362
OIFL01000018
99847
Bacteroidota
GTA
Tyr
>WENV182410371
OIFL01000024
99847
Bacteroidota
GTA
Tyr
>WENV182410545
OIFL01003102
99847
Bacteroidota
GTA
Tyr
>WENV182410582
OIFL01004527
399200
Bacteroidota
CAT
Met
>WENV182410379
OIFL01000033
332896
Bacteroidota
TTT
Lys
>WENV182410592
OIFL01005219
332896
Bacteroidota
TTT
Lys
>WENV182410624
OIFL01009359
332896
Bacteroidota
TTT
Lys
>WENV182410355
OIFL01000014
488746
Bacteroidota
CTG
Gln
>WENV182410604
OIFL01006111
187400
Bacteroidota
GTT
Asn
>WENV182410605
OIFL01006111
187400
Bacteroidota
GTT
Asn
>WENV182410665
OIFL01016441
175844
Bacteroidota
GGC
Ala
>WENV182410621
OIFL01009314
73011
Bacteroidota
CAA
Leu
>WENV182410486
OIFL01001179
158068
Bacteroidota
GGG
Pro
>WENV182410637
OIFL01011330
158068
Bacteroidota
GGG
Pro
>WENV182410334
OIFL01000001
398828
Bacteroidota
CCG
Arg
>WENV182410365
OIFL01000020
140771
Bacteroidota
>WENV182410712
OIFL01024889
400088
Bacteroidota
GGT
Thr
>WENV182410399
OIFL01000136
280446
Bacteroidota
TTT
Lys
>WENV182410462
OIFL01000789
280446
Bacteroidota
TTT
Lys
>WENV182410350
OIFL01000009
484496
Bacteroidota
TTG
Gln
>WENV182410572
OIFL01004027
484496
Bacteroidota
TTG
Gln
>WENV182410589
OIFL01004711
285750
Bacteroidota
CCC
Gly
>WENV182410381
OIFL01000036
398836
Bacteroidota
GCA
Cys
>WENV182410488
OIFL01001222
398836
Bacteroidota
GCA
Cys
>WENV182410517
OIFL01001822
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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