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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182446965
OILD01000072
280557
Bacteroidota
CAT
Met
>WENV182446980
OILD01000561
175936
Bacteroidota
CAT
Met
>WENV182446981
OILD01000682
57807
Bacteroidota
TGA
Ser
>WENV182447002
OILD01003223
398860
Bacteroidota
CTC
Glu
>WENV182446964
OILD01000061
480404
Bacteroidota
TTG
Gln
>WENV182446971
OILD01000172
99847
Bacteroidota
GTA
Tyr
>WENV182447013
OILD01006014
280532
Bacteroidota
>WENV182447005
OILD01003789
480318
Bacteroidota
CTG
Gln
>WENV182446994
OILD01001862
158068
Bacteroidota
GGG
Pro
>WENV182447012
OILD01005466
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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