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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182468729
OIPA01000001
144657
Bacteroidota
CGG
Pro
>WENV182468734
OIPA01000001
185921
Bacteroidota
GTC
Asp
>WENV182468740
OIPA01000003
80614
Bacteroidota
>WENV182468741
OIPA01000003
185921
Bacteroidota
GTC
Asp
>WENV182468747
OIPA01000008
144933
Bacteroidota
TCT
Arg
>WENV182468753
OIPA01000014
339341
Bacteroidota
GGT
Thr
>WENV182468757
OIPA01000015
338486
Bacteroidota
CAT
Met
>WENV182468758
OIPA01000015
338486
Bacteroidota
CAT
Met
>WENV182468765
OIPA01000020
58715
Bacteroidota
GAG
Leu
>WENV182468763
OIPA01000020
235129
Bacteroidota
GCC
Gly
>WENV182468767
OIPA01000024
95875
Bacteroidota
TAG
Leu
>WENV182468774
OIPA01000030
235129
Bacteroidota
GCC
Gly
>WENV182468772
OIPA01000030
235129
Bacteroidota
GCC
Gly
>WENV182468786
OIPA01000044
338132
Bacteroidota
GCA
Cys
>WENV182468792
OIPA01000081
80614
Bacteroidota
>WENV182468793
OIPA01000082
238121
Bacteroidota
CTT
Lys
>WENV182468795
OIPA01000096
20893
Bacteroidota
GGA
Ser
>WENV182468797
OIPA01000108
240012
Bacteroidota
CCC
Gly
>WENV182468826
OIPA01000337
238121
Bacteroidota
CTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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