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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182470944
OIPI01000036
280557
Bacteroidota
CAT
Met
>WENV182470952
OIPI01000056
398836
Bacteroidota
GCA
Cys
>WENV182470958
OIPI01000096
484496
Bacteroidota
TTG
Gln
>WENV182470962
OIPI01000110
280446
Bacteroidota
TTT
Lys
>WENV182470964
OIPI01000122
172207
Bacteroidota
GGG
Pro
>WENV182470974
OIPI01000173
27502
Bacteroidota
GGA
Ser
>WENV182470982
OIPI01000314
488746
Bacteroidota
CTG
Gln
>WENV182470983
OIPI01000320
280446
Bacteroidota
TTT
Lys
>WENV182470994
OIPI01000416
27502
Bacteroidota
GGA
Ser
>WENV182470998
OIPI01000469
398828
Bacteroidota
CCG
Arg
>WENV182471006
OIPI01000572
117741
Bacteroidota
TAG
Leu
>WENV182471027
OIPI01001447
405877
Bacteroidota
GGT
Thr
>WENV182471087
OIPI01004087
175903
Bacteroidota
GTG
His
>WENV182471131
OIPI01008145
365112
Bacteroidota
TTT
Lys
>WENV182471162
OIPI01012912
289031
Bacteroidota
CAT
Met
>WENV182471205
OIPI01018506
20492
Bacteroidota
GGA
Ser
>WENV182471217
OIPI01022016
280451
Bacteroidota
CGT
Thr
>WENV182471224
OIPI01023403
351598
Bacteroidota
CGG
Pro
>WENV182471252
OIPI01031646
186874
Bacteroidota
CAT
Met
>WENV182471255
OIPI01033803
20206
Bacteroidota
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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