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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
54 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182697979
OJOM01000083
117741
Bacteroidota
TAG
Leu
>WENV182698316
OJOM01002974
398829
Bacteroidota
CCT
Arg
>WENV182698027
OJOM01000136
175838
Bacteroidota
GTT
Asn
>WENV182698240
OJOM01001519
175904
Bacteroidota
CGG
Pro
>WENV182698079
OJOM01000293
280557
Bacteroidota
CAT
Met
>WENV182698437
OJOM01006764
280557
Bacteroidota
CAT
Met
>WENV182698412
OJOM01005946
398871
Bacteroidota
TTC
Glu
>WENV182697901
OJOM01000022
56493
Bacteroidota
TGA
Ser
>WENV182697945
OJOM01000043
56493
Bacteroidota
TGA
Ser
>WENV182698023
OJOM01000133
175903
Bacteroidota
GTG
His
>WENV182697896
OJOM01000019
351598
Bacteroidota
CGG
Pro
>WENV182698162
OJOM01000779
351598
Bacteroidota
CGG
Pro
>WENV182698196
OJOM01001105
351598
Bacteroidota
CGG
Pro
>WENV182698347
OJOM01003311
351598
Bacteroidota
CGG
Pro
>WENV182698182
OJOM01000923
118089
Bacteroidota
TAG
Leu
>WENV182698524
OJOM01012497
405877
Bacteroidota
GGT
Thr
>WENV182698350
OJOM01003367
29791
Bacteroidota
GCT
Ser
>WENV182697948
OJOM01000054
182267
Bacteroidota
GTT
Asn
>WENV182698001
OJOM01000107
56072
Bacteroidota
TAA
Leu
>WENV182698430
OJOM01006481
56072
Bacteroidota
TAA
Leu
>WENV182698185
OJOM01001004
398860
Bacteroidota
CTC
Glu
>WENV182698314
OJOM01002863
280451
Bacteroidota
CGT
Thr
>WENV182698317
OJOM01003001
418894
Bacteroidota
TTC
Glu
>WENV182698171
OJOM01000838
99847
Bacteroidota
GTA
Tyr
>WENV182698229
OJOM01001435
99847
Bacteroidota
GTA
Tyr
>WENV182698266
OJOM01001766
99847
Bacteroidota
GTA
Tyr
>WENV182698592
OJOM01021485
99847
Bacteroidota
GTA
Tyr
>WENV182698117
OJOM01000495
399200
Bacteroidota
CAT
Met
>WENV182698480
OJOM01008733
399200
Bacteroidota
CAT
Met
>WENV182698456
OJOM01007649
186874
Bacteroidota
CAT
Met
>WENV182697852
OJOM01000002
332896
Bacteroidota
TTT
Lys
>WENV182698018
OJOM01000130
332896
Bacteroidota
TTT
Lys
>WENV182698150
OJOM01000673
332896
Bacteroidota
TTT
Lys
>WENV182698222
OJOM01001333
332896
Bacteroidota
TTT
Lys
>WENV182698374
OJOM01003892
332896
Bacteroidota
TTT
Lys
>WENV182698397
OJOM01004940
332896
Bacteroidota
TTT
Lys
>WENV182698031
OJOM01000154
488746
Bacteroidota
CTG
Gln
>WENV182698377
OJOM01004083
280478
Bacteroidota
GCC
Gly
>WENV182698534
OJOM01013713
280478
Bacteroidota
GCC
Gly
>WENV182698032
OJOM01000154
20766
Bacteroidota
GGA
Ser
>WENV182697993
OJOM01000093
158068
Bacteroidota
GGG
Pro
>WENV182698019
OJOM01000130
158068
Bacteroidota
GGG
Pro
>WENV182698036
OJOM01000165
398828
Bacteroidota
CCG
Arg
>WENV182698391
OJOM01004731
74084
Bacteroidota
CAG
Leu
>WENV182697890
OJOM01000015
140771
Bacteroidota
>WENV182698174
OJOM01000849
140771
Bacteroidota
>WENV182697954
OJOM01000058
176192
Bacteroidota
TCT
Arg
>WENV182698514
OJOM01011599
400088
Bacteroidota
GGT
Thr
>WENV182698052
OJOM01000204
280446
Bacteroidota
TTT
Lys
>WENV182698058
OJOM01000221
280446
Bacteroidota
TTT
Lys
>WENV182698003
OJOM01000114
484496
Bacteroidota
TTG
Gln
>WENV182698278
OJOM01002041
484496
Bacteroidota
TTG
Gln
>WENV182698439
OJOM01006845
285750
Bacteroidota
CCC
Gly
>WENV182697897
OJOM01000020
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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