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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182701857
OJOQ01000009
172085
Bacteroidota
TAC
Val
>WENV182701868
OJOQ01000026
172085
Bacteroidota
TAC
Val
>WENV182701881
OJOQ01000054
56385
Bacteroidota
TGA
Ser
>WENV182701893
OJOQ01000071
118221
Bacteroidota
CAA
Leu
>WENV182701894
OJOQ01000074
201819
Bacteroidota
CAT
Met
>WENV182701919
OJOQ01000131
400161
Bacteroidota
GGT
Thr
>WENV182701920
OJOQ01000131
312035
Bacteroidota
CCA
Trp
>WENV182701927
OJOQ01000161
242241
Bacteroidota
GTC
Asp
>WENV182701928
OJOQ01000161
242241
Bacteroidota
GTC
Asp
>WENV182701929
OJOQ01000161
242241
Bacteroidota
GTC
Asp
>WENV182701954
OJOQ01000263
156422
Bacteroidota
TAC
Val
>WENV182701969
OJOQ01000305
46648
Bacteroidota
TAA
Leu
>WENV182701973
OJOQ01000322
404109
Bacteroidota
CTC
Glu
>WENV182701972
OJOQ01000322
404109
Bacteroidota
CTC
Glu
>WENV182701981
OJOQ01000345
481328
Bacteroidota
TTG
Gln
>WENV182702035
OJOQ01000833
365112
Bacteroidota
TTT
Lys
>WENV182702059
OJOQ01001035
175944
Bacteroidota
CAT
Met
>WENV182702140
OJOQ01002979
484496
Bacteroidota
TTG
Gln
>WENV182702158
OJOQ01003636
289031
Bacteroidota
CAT
Met
>WENV182702209
OJOQ01005614
178133
Bacteroidota
GAT
Ile
>WENV182702264
OJOQ01009482
189252
Bacteroidota
GGC
Ala
>WENV182702273
OJOQ01010644
20206
Bacteroidota
GGA
Ser
>WENV182702275
OJOQ01010843
399200
Bacteroidota
CAT
Met
>WENV182702298
OJOQ01014717
186142
Bacteroidota
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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