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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
47 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182706344
OJOW01000472
140771
Bacteroidota
>WENV182706272
OJOW01000089
280557
Bacteroidota
CAT
Met
>WENV182706277
OJOW01000102
280557
Bacteroidota
CAT
Met
>WENV182706354
OJOW01000572
280557
Bacteroidota
CAT
Met
>WENV182706442
OJOW01003832
280557
Bacteroidota
CAT
Met
>WENV182706468
OJOW01006291
399200
Bacteroidota
CAT
Met
>WENV182706429
OJOW01003371
285750
Bacteroidota
CCC
Gly
>WENV182706235
OJOW01000040
398828
Bacteroidota
CCG
Arg
>WENV182706313
OJOW01000246
398828
Bacteroidota
CCG
Arg
>WENV182706353
OJOW01000563
398829
Bacteroidota
CCT
Arg
>WENV182706197
OJOW01000010
351598
Bacteroidota
CGG
Pro
>WENV182706243
OJOW01000049
351598
Bacteroidota
CGG
Pro
>WENV182706355
OJOW01000586
351598
Bacteroidota
CGG
Pro
>WENV182706493
OJOW01010471
351598
Bacteroidota
CGG
Pro
>WENV182706470
OJOW01006782
488746
Bacteroidota
CTG
Gln
>WENV182706307
OJOW01000232
398836
Bacteroidota
GCA
Cys
>WENV182706402
OJOW01002017
280478
Bacteroidota
GCC
Gly
>WENV182706498
OJOW01011143
280478
Bacteroidota
GCC
Gly
>WENV182706530
OJOW01014350
280478
Bacteroidota
GCC
Gly
>WENV182706407
OJOW01002256
20449
Bacteroidota
GGA
Ser
>WENV182706273
OJOW01000090
27524
Bacteroidota
GGA
Ser
>WENV182706175
OJOW01000002
27502
Bacteroidota
GGA
Ser
>WENV182706274
OJOW01000091
170323
Bacteroidota
GGG
Pro
>WENV182706316
OJOW01000267
170323
Bacteroidota
GGG
Pro
>WENV182706352
OJOW01000553
99847
Bacteroidota
GTA
Tyr
>WENV182706404
OJOW01002124
99847
Bacteroidota
GTA
Tyr
>WENV182706437
OJOW01003577
175906
Bacteroidota
GTG
His
>WENV182706202
OJOW01000010
182267
Bacteroidota
GTT
Asn
>WENV182706338
OJOW01000410
56072
Bacteroidota
TAA
Leu
>WENV182706347
OJOW01000476
56072
Bacteroidota
TAA
Leu
>WENV182706517
OJOW01012584
56072
Bacteroidota
TAA
Leu
>WENV182706253
OJOW01000057
117741
Bacteroidota
TAG
Leu
>WENV182706427
OJOW01003189
118089
Bacteroidota
TAG
Leu
>WENV182706457
OJOW01004800
176192
Bacteroidota
TCT
Arg
>WENV182706222
OJOW01000028
56493
Bacteroidota
TGA
Ser
>WENV182706231
OJOW01000034
56493
Bacteroidota
TGA
Ser
>WENV182706339
OJOW01000416
56493
Bacteroidota
TGA
Ser
>WENV182706436
OJOW01003567
56493
Bacteroidota
TGA
Ser
>WENV182706462
OJOW01005551
56493
Bacteroidota
TGA
Ser
>WENV182706396
OJOW01001575
69204
Bacteroidota
TGA
Ser
>WENV182706410
OJOW01002300
69204
Bacteroidota
TGA
Ser
>WENV182706389
OJOW01001238
398871
Bacteroidota
TTC
Glu
>WENV182706179
OJOW01000003
365112
Bacteroidota
TTT
Lys
>WENV182706217
OJOW01000025
365112
Bacteroidota
TTT
Lys
>WENV182706315
OJOW01000267
365112
Bacteroidota
TTT
Lys
>WENV182706336
OJOW01000405
365112
Bacteroidota
TTT
Lys
>WENV182706360
OJOW01000625
365112
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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