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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
55 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183008662
OLDN01000002
132360
Bacteroidota
GGG
Pro
>WENV183008663
OLDN01000002
235097
Bacteroidota
TTT
Lys
>WENV183008664
OLDN01000002
419272
Bacteroidota
CTG
Gln
>WENV183008665
OLDN01000002
16220
Bacteroidota
GGA
Ser
>WENV183008667
OLDN01000004
338132
Bacteroidota
GCA
Cys
>WENV183008672
OLDN01000005
301449
Bacteroidota
CGG
Pro
>WENV183008676
OLDN01000007
338125
Bacteroidota
CCT
Arg
>WENV183008680
OLDN01000009
52358
Bacteroidota
TGA
Ser
>WENV183008681
OLDN01000011
415410
Bacteroidota
TTG
Gln
>WENV183008689
OLDN01000017
52358
Bacteroidota
TGA
Ser
>WENV183008690
OLDN01000017
144656
Bacteroidota
GTG
His
>WENV183008691
OLDN01000017
16224
Bacteroidota
GGA
Ser
>WENV183008693
OLDN01000018
338124
Bacteroidota
CCG
Arg
>WENV183008696
OLDN01000029
19528
Bacteroidota
GGA
Ser
>WENV183008697
OLDN01000033
239647
Bacteroidota
TTT
Lys
>WENV183008700
OLDN01000053
235207
Bacteroidota
CAT
Met
>WENV183008707
OLDN01000085
338314
Bacteroidota
CCT
Arg
>WENV183008709
OLDN01000088
144590
Bacteroidota
GTT
Asn
>WENV183008710
OLDN01000088
144590
Bacteroidota
GTT
Asn
>WENV183008714
OLDN01000091
144655
Bacteroidota
GGC
Ala
>WENV183008716
OLDN01000097
411629
Bacteroidota
TTG
Gln
>WENV183008719
OLDN01000104
239647
Bacteroidota
TTT
Lys
>WENV183008720
OLDN01000108
338132
Bacteroidota
GCA
Cys
>WENV183008722
OLDN01000109
132360
Bacteroidota
GGG
Pro
>WENV183008723
OLDN01000111
411543
Bacteroidota
CTG
Gln
>WENV183008725
OLDN01000121
235102
Bacteroidota
CGT
Thr
>WENV183008727
OLDN01000155
235182
Bacteroidota
>WENV183008728
OLDN01000159
235207
Bacteroidota
CAT
Met
>WENV183008729
OLDN01000174
338132
Bacteroidota
GCA
Cys
>WENV183008731
OLDN01000180
80607
Bacteroidota
GTA
Tyr
>WENV183008736
OLDN01000218
19317
Bacteroidota
GGA
Ser
>WENV183008738
OLDN01000236
425638
Bacteroidota
CTG
Gln
>WENV183008739
OLDN01000245
181746
Bacteroidota
GGC
Ala
>WENV183008740
OLDN01000256
52358
Bacteroidota
TGA
Ser
>WENV183008742
OLDN01000281
338132
Bacteroidota
GCA
Cys
>WENV183008743
OLDN01000290
144688
Bacteroidota
CAT
Met
>WENV183008745
OLDN01000313
95559
Bacteroidota
TAG
Leu
>WENV183008746
OLDN01000339
185921
Bacteroidota
GTC
Asp
>WENV183008748
OLDN01000345
95618
Bacteroidota
TAG
Leu
>WENV183008762
OLDN01000500
144933
Bacteroidota
TCT
Arg
>WENV183008768
OLDN01000586
272983
Bacteroidota
CGT
Thr
>WENV183008772
OLDN01000641
415410
Bacteroidota
TTG
Gln
>WENV183008786
OLDN01000772
338132
Bacteroidota
GCA
Cys
>WENV183008792
OLDN01000916
126641
Bacteroidota
TAC
Val
>WENV183008793
OLDN01000916
126641
Bacteroidota
TAC
Val
>WENV183008794
OLDN01000956
154643
Bacteroidota
CAT
Met
>WENV183008821
OLDN01001660
153993
Bacteroidota
GAT
Ile
>WENV183008827
OLDN01001877
243025
Bacteroidota
CAT
Met
>WENV183008844
OLDN01002578
353927
Bacteroidota
TTC
Glu
>WENV183008849
OLDN01002882
414426
Bacteroidota
CTG
Gln
>WENV183008902
OLDN01008399
280513
Bacteroidota
TTT
Lys
>WENV183008903
OLDN01008654
267954
Bacteroidota
GCC
Gly
>WENV183008910
OLDN01009881
151121
Bacteroidota
CAT
Met
>WENV183008951
OLDN01015287
240012
Bacteroidota
CCC
Gly
>WENV183008952
OLDN01015548
344692
Bacteroidota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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