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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183017995
OLEX01006976
235102
Bacteroidota
CGT
Thr
>WENV183017984
OLEX01005615
243025
Bacteroidota
CAT
Met
>WENV183017914
OLEX01002259
338155
Bacteroidota
CTC
Glu
>WENV183017977
OLEX01005167
343138
Bacteroidota
CCT
Arg
>WENV183017942
OLEX01003481
415410
Bacteroidota
TTG
Gln
>WENV183018035
OLEX01011554
338124
Bacteroidota
CCG
Arg
>WENV183017952
OLEX01003887
338132
Bacteroidota
GCA
Cys
>WENV183018044
OLEX01012982
144656
Bacteroidota
GTG
His
>WENV183018020
OLEX01010341
235207
Bacteroidota
CAT
Met
>WENV183017979
OLEX01005304
80607
Bacteroidota
GTA
Tyr
>WENV183017980
OLEX01005522
154643
Bacteroidota
CAT
Met
>WENV183017886
OLEX01001521
338165
Bacteroidota
GGT
Thr
>WENV183017830
OLEX01000830
132360
Bacteroidota
GGG
Pro
>WENV183017762
OLEX01000223
425638
Bacteroidota
CTG
Gln
>WENV183017897
OLEX01001747
353927
Bacteroidota
TTC
Glu
>WENV183017913
OLEX01002259
23696
Bacteroidota
GCT
Ser
>WENV183017856
OLEX01001129
16224
Bacteroidota
GGA
Ser
>WENV183017915
OLEX01002432
338125
Bacteroidota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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