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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183176702
OLPF01037231
338124
Bacteroidota
CCG
Arg
>WENV183176334
OLPF01005320
343138
Bacteroidota
CCT
Arg
>WENV183176063
OLPF01002082
338125
Bacteroidota
CCT
Arg
>WENV183176263
OLPF01004003
301449
Bacteroidota
CGG
Pro
>WENV183176789
OLPF01066629
235102
Bacteroidota
CGT
Thr
>WENV183176482
OLPF01010780
338155
Bacteroidota
CTC
Glu
>WENV183176543
OLPF01015094
425638
Bacteroidota
CTG
Gln
>WENV183176531
OLPF01013888
338132
Bacteroidota
GCA
Cys
>WENV183176525
OLPF01013551
338132
Bacteroidota
GCA
Cys
>WENV183176441
OLPF01008571
20893
Bacteroidota
GGA
Ser
>WENV183176294
OLPF01004542
16999
Bacteroidota
GGA
Ser
>WENV183176782
OLPF01064535
19528
Bacteroidota
GGA
Ser
>WENV183176704
OLPF01038086
143169
Bacteroidota
GGG
Pro
>WENV183176157
OLPF01002781
80607
Bacteroidota
GTA
Tyr
>WENV183176646
OLPF01027944
144656
Bacteroidota
GTG
His
>WENV183176480
OLPF01010677
144933
Bacteroidota
TCT
Arg
>WENV183176362
OLPF01006196
56823
Bacteroidota
TGA
Ser
>WENV183176609
OLPF01023055
436206
Bacteroidota
TTG
Gln
>WENV183176536
OLPF01014305
235097
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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