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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183724866
PJQE01086478
296910
Betaproteobacteria
GCC
Gly
>WENV183725364
PJQE01257534
412167
Betaproteobacteria
GCA
Cys
>WENV183724501
PJQE01023215
85133
Betaproteobacteria
GTA
Tyr
>WENV183724823
PJQE01075116
61237
Betaproteobacteria
TAG
Leu
>WENV183725131
PJQE01164126
292518
Betaproteobacteria
TTT
Lys
>WENV183724918
PJQE01100862
146726
Betaproteobacteria
TCT
Arg
>WENV183724924
PJQE01101614
146726
Betaproteobacteria
TCT
Arg
>WENV183725121
PJQE01159175
59085
Betaproteobacteria
TAG
Leu
>WENV183724719
PJQE01054580
236106
Betaproteobacteria
CAT
Met
>WENV183725099
PJQE01153053
381770
Betaproteobacteria
CCT
Arg
>WENV183724581
PJQE01031190
147666
Betaproteobacteria
CAT
Met
>WENV183725150
PJQE01172109
254339
Betaproteobacteria
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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