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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1017657
SRR035082.176058
282274
Chlorobiota
CGC
Ala
>SRA1017711
SRR035082.184109
118002
Chlorobiota
CAG
Leu
>SRA1017835
SRR035082.204388
177570
Chlorobiota
GGG
Pro
>SRA1018200
SRR035082.254988
177501
Chlorobiota
GTG
His
>SRA1018428
SRR035082.290217
281169
Chlorobiota
CAT
Met
>SRA1018491
SRR035082.300183
230640
Chlorobiota
GAT
Ile
>SRA1018516
SRR035082.303563
118002
Chlorobiota
CAG
Leu
>SRA1018640
SRR035082.326561
118002
Chlorobiota
CAG
Leu
>SRA1018642
SRR035082.326690
177626
Chlorobiota
TAC
Val
>SRA1018808
SRR035082.350828
118002
Chlorobiota
CAG
Leu
>SRA1019140
SRR035082.408994
282414
Chlorobiota
TGC
Ala
>SRA1019317
SRR035082.434668
176477
Chlorobiota
CAT
Met
>SRA1019518
SRR035082.470182
282414
Chlorobiota
TGC
Ala
>SRA1019517
SRR035082.470182
230640
Chlorobiota
GAT
Ile
>SRA1016883
SRR035082.47164
177501
Chlorobiota
GTG
His
>SRA1019570
SRR035082.477647
177726
Chlorobiota
CAT
Met
>SRA1019571
SRR035082.477647
282373
Chlorobiota
CCC
Gly
>SRA1016888
SRR035082.47881
282471
Chlorobiota
CGG
Pro
>SRA1016909
SRR035082.50899
282471
Chlorobiota
CGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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