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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170163903
CEOM01185464
237009
Cyanobacteriota
GGC
Ala
>WENV170162594
CEOM01043999
162341
Cyanobacteriota
TCT
Arg
>WENV170162514
CEOM01036817
145761
Cyanobacteriota
GTC
Asp
>WENV170163920
CEOM01187996
145761
Cyanobacteriota
GTC
Asp
>WENV170163355
CEOM01122750
339686
Cyanobacteriota
TAC
Val
>WENV170163519
CEOM01141500
339686
Cyanobacteriota
TAC
Val
>WENV170163829
CEOM01178701
339686
Cyanobacteriota
TAC
Val
>WENV170162117
CEOM01004560
25356
Cyanobacteriota
GGA
Ser
>WENV170162457
CEOM01032642
245150
Cyanobacteriota
GTG
His
>WENV170162513
CEOM01036817
237899
Cyanobacteriota
CCA
Trp
>WENV170164283
CEOM01228509
344607
Cyanobacteriota
CCC
Gly
>WENV170163158
CEOM01101466
344607
Cyanobacteriota
CCC
Gly
>WENV170162582
CEOM01043248
339688
Cyanobacteriota
GAC
Val
>WENV170163678
CEOM01163581
162346
Cyanobacteriota
GGG
Pro
>WENV170162846
CEOM01069305
162346
Cyanobacteriota
GGG
Pro
>WENV170163321
CEOM01120542
352687
Cyanobacteriota
GAC
Val
>WENV170164040
CEOM01196203
252089
Cyanobacteriota
GTG
His
>WENV170162749
CEOM01060319
148812
Cyanobacteriota
CGG
Pro
>WENV170164538
CEOM01374193
153480
Cyanobacteriota
CAT
Met
>WENV170162669
CEOM01050977
37223
Cyanobacteriota
TAA
Leu
>WENV170162455
CEOM01032303
147238
Cyanobacteriota
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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